Streptomyces fagopyri: GFH48_16975
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Entry
GFH48_16975 CDS
T06986
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy03420
Nucleotide excision repair
sfy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GFH48_16975
03430 Mismatch repair
GFH48_16975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfy03400
]
GFH48_16975
Enzymes [BR:
sfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFH48_16975
DNA repair and recombination proteins [BR:
sfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GFH48_16975
MMR (mismatch excision repair)
Other MMR factors
GFH48_16975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFZ74732
UniProt:
A0A5Q0LC90
LinkDB
All DBs
Position
complement(3924554..3927157)
Genome browser
AA seq
867 aa
AA seq
DB search
MSSLFDDSFLADLKPSGAHEEEPPPPPEDEVAEPLPDDLFGGRFDVPPDRDAYYRDGAHR
PAVDPAALLDGLNENQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLGERHVHPGQIL
AITFTNKAAGEMKERVEQLVGPRAHAMWVMTFHSACVRILRRESKRLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAGQAADGFEKTLAQAYAMY
QSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVRELV
GPASGDRPEGLPPAEGDLGPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLE
QNYRSTQTILTAANAVIERNESRRPKNLWTNAGAGSNITGYVADTEHDEAQFVADEIDRL
TDAGDAKAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLS
NPEDSVPLRRILNVPKRGIGDRAEAMIDALSQRERISFPQALRRVDEAYGMAARSTNAVK
RFNALMEDLRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALE
FEQESGGGEDGTGAAGDAAGATDAAGATGAAGATDAAGTTDAAEGVAVAGGLSGFLERVA
LVADSDQIPDEDDGNGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRALGQVKELEEER
RLAYVGITRARERLYLTRSSMRSAWGQPSYNPPSRFLEEIPDTHLEWKRTGAMAPVSSGP
VSGVAASLSSSRSRSAASGASGFATRRGASEKPVVSLAVGDRVTHDQFGLGTVVGVKGTG
ANAEATVDFGEPKPKRLLLRYAPVEKL
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagcttcctggcggacctcaagccttccggggcccatgag
gaagagcctccgccgccgcccgaggacgaggtggcggagccgcttccggacgacctgttc
ggcggccgcttcgacgtgcccccggaccgcgacgcgtactaccgcgacggcgcccaccgg
cccgccgtggacccggcggccctgctggacgggctcaacgagaaccagcgcgcggccgtg
gtgcactccggctccccgctgctcatcgtggccggcgccggctccggcaagacccgggtg
ctcacgcaccggatcgcgcacctgctgggcgagcgccatgtccaccccggccagatcctc
gcgatcaccttcacgaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctcgtc
ggcccgcgcgcccacgcgatgtgggtgatgaccttccacagcgcgtgcgtacgcatcctg
cgccgcgagtcgaagaggctcggcttcacgtcctccttctcgatctacgacgccgccgac
agcaagcgcctgatggccctggtctgccgggacctggacctcgacccgaagcgctttccg
ccgaagtcgttcagcgcgaagatctccaacctgaagaacgagctgatcgacgaggaggac
ttcgccggccaggcggcggacggtttcgagaagaccctcgcgcaggcctacgcgatgtac
cagtcgcggctgcgcgaggccaacgcgctcgacttcgacgacctgatcatgacgacggtc
aacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccgccacgtc
ctggtcgacgagtaccaggacacgaaccacgcgcagtacgccctggtcagggagctcgtg
ggaccggcgagcggcgaccgccccgagggcctgccgccggccgagggcgacctcgggccc
gccgagctgtgcgtcgtgggtgacgccgaccagtcgatctacgccttccgcggcgcgacc
atccgcaacatcctccagttcgaggaggactacccggacgcgacgaccatcctgctggag
cagaactaccgctccacccagacgatcctcaccgcggcgaacgcggtcatcgagcgcaac
gagtcgcgccgccccaagaacctgtggaccaacgcgggcgccgggtcgaacatcacgggc
tatgtcgccgacaccgagcacgacgaggcacagttcgtcgccgacgagatagaccgtctc
accgacgcgggcgacgcgaaggcgggcgatgtcgcggtcttctaccggacgaacgcccag
tcccgtgtgttcgaggagatcttcatccgcgtcggcctgccctacaaggtcgtcggcggt
gtccgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtcctgtcc
aaccccgaggactccgtcccgctgcgccggatcctgaacgtccccaagcgcgggatcggt
gaccgcgccgaggcgatgatcgacgccctctcgcagcgggagcggatcagcttcccgcag
gcgctgcgccgcgtcgacgaggcgtacggcatggcggcgcggtcgacgaacgccgtgaag
cggttcaacgcgctcatggaggacctccgtacgatcgtcgagtccggcgcgggcccggcg
acggtcctggaggcggtcctcgaacgcaccggctatctcgccgagctgcaggcctcgacg
gacccacaggacgagacccggatcgagaacctccaggaactcgcggccgtggcgcttgag
ttcgagcaggagtccggcgggggcgaggacgggaccggggcggccggcgatgccgcaggg
gcgaccgatgccgcaggggcgaccggtgccgctggggcgaccgatgccgctgggacgacc
gatgccgctgagggggtcgcggtggccggcgggctctccgggttcctggagcgggtcgcg
ctcgtcgccgactccgaccagatccccgacgaggacgacggcaacggcgtcatcaccctg
atgaccctgcacaccgccaagggcctggagttcccggtcgtgttcctcaccggcatggag
gacggcgtcttcccgcacatgcgcgcgctggggcaggtcaaggagctggaggaggagcgg
cgtctcgcgtacgtcggcatcacgcgcgcgcgtgagcgcctctacctcacccgctcgtcc
atgcgcagcgcgtggggccagccctcgtacaacccgccctcccgcttcctggaggagatc
ccggacacgcatctggagtggaagcgcacgggcgccatggccccggtgtcctcggggccc
gtctcgggtgtggcggcctcgctgtcgtcctcgcgctcacggtccgcggcgtccggtgcc
tccggcttcgcgacgcgccgcggggcctccgagaagccggtcgtctcgctggcggtgggc
gaccgggtcacccacgaccagttcgggctcggcacggtggtcggggtgaagggcacgggg
gcgaacgcggaggccacggtcgacttcggcgagcccaagccgaagcggctgctgctgcgg
tacgcgccggtggagaagctctag
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