Streptomyces fagopyri: GFH48_17870
Help
Entry
GFH48_17870 CDS
T06986
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFH48_17870 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfy03019
]
GFH48_17870 (recQ)
03400 DNA repair and recombination proteins [BR:
sfy03400
]
GFH48_17870 (recQ)
Enzymes [BR:
sfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFH48_17870 (recQ)
Messenger RNA biogenesis [BR:
sfy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GFH48_17870 (recQ)
DNA repair and recombination proteins [BR:
sfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GFH48_17870 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QFZ78802
UniProt:
A0A5Q0LNA0
LinkDB
All DBs
Position
complement(4113877..4115886)
Genome browser
AA seq
669 aa
AA seq
DB search
MGGTGVMTEADATEQLGEGEALATLHRVFGYDAFRGEQEAIIEHVVAGGDAVVLMPTGGG
KSLCYQIPSLVRPGTGVVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRVVEAELL
AGELDLLYLAPERLRLDSTLGLLSRAKISVFAIDEAHCVAQWGHDFRPDYLALSLLGERW
PDVPRIALTATATHATHKEITQRLAMPRARHFEASFDRPNIQYRIVPKADPKKQLLSFLR
EEHAGDAGIVYCLSRNSVEKTAEFLSRNGVEAVPYHAGLDAGTRAAHQSRFLREEGLVVV
ATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGQPSTAWMAYGLQDVVQQRKL
IQGSEGDEAFRRRAAAHLDSMLALCETARCRRSQLLAYFGQDPHTPACGNCDTCLTPPET
WDGTVAAQKLLSTVVRLQRERGQKFGALQIVDILLGRRTAKVIQFDHDQLSVFGIGEDLS
ESEWRGVVRQLLAQGLLAVEGEYGTLVLTEESGTVLRRERDVPLRKEQPKPAVSRSSSSS
SRGERKAKAVAELPQELVPAFEALRAWRAEQAKEQGVPAYVIFHDATLREIATVWPASVA
DLGGISGVGEKKLATYGEGVVGVLAGLGGAPGGAPAPAPAPAPAADEAAEAPDPDWPEMD
AEPEPEDWM
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggacgggtgtgatgaccgaagcggacgcgacggagcagctgggggagggcgag
gcactggccacgctccaccgggtcttcgggtacgacgccttccgcggcgagcaggaagcg
atcatcgagcacgtggtggcgggcggtgacgccgtcgtcctgatgccgacgggtggcggc
aagtcactctgctaccagatcccgtccctggtcagaccgggtacgggcgtggtcgtctca
cctctcatcgccctgatgcaggaccaggtggacgcgctgcgcgcgctgggcgtgcgcgcc
gggttcatgaactccacgcaggacttcgacgagcgccgcgtggtcgaggccgagctgctg
gcgggcgagctggacctgctgtatctggccccggagcggctgcggctggacagcaccctg
ggcctgctctcgcgggcgaagatctccgtcttcgcgatcgacgaggcgcactgcgtggcc
cagtggggtcacgacttccgccccgactacctggcgctctcgctgctcggcgagcgctgg
ccggatgtcccgcgcatagcgctgacggccacggccacgcacgcgacgcacaaggagatc
acccagcgcctggccatgccgcgcgcccgccacttcgaggcgagtttcgaccggcccaac
atccagtaccggatcgtcccgaaggccgaccccaagaagcagctgctgtcgttcctgcgc
gaggagcacgcgggtgacgcgggcatcgtgtactgcctctcccgcaactcggtcgagaag
accgccgagttcctctcccgcaacggcgtcgaggcggtgccctaccacgcgggcctggac
gcgggcacccgtgccgcgcaccagtcgcgcttcctgcgtgaagagggcctggtcgtcgtc
gccaccatcgccttcggcatgggcatcgacaagccggacgtgcggttcgtcgcccacctc
gatctgcccaagtcggtggaggggtactaccaggagacgggccgcgcgggccgtgacggg
cagccgtccacggcatggatggcctacggcctgcaggacgtggtgcagcagcgcaagctg
atccagggctccgagggcgacgaggcgttccgccggcgggcggccgcccatctggactcg
atgctggcattgtgcgagacggcccggtgccggcgttcgcagctgctcgcctacttcggc
caggacccccacaccccggcgtgcggcaactgcgacacgtgtctgacgccgcccgagacc
tgggacggcacggtcgcggcgcagaagctgctctcgacggtggtgcggttgcagcgggag
cgcgggcagaagttcggcgcgctccagatcgtcgacatcctgctggggcgccggaccgcc
aaggtgatccagttcgaccacgaccagctgtccgtgttcggcatcggcgaggatctgtcc
gagtccgaatggcggggcgtggtgcggcagttgctggcgcaggggctgctcgcggtcgag
ggcgagtacgggacgctggtgctgaccgaggagagcgggaccgtactgcggcgtgagcgt
gacgtgccgttgcgcaaggagcagccgaagccggccgtgtcccgttcctcgtcctcgtcg
tcgcggggcgaacgcaaggccaaggccgtcgcggagctgccgcaggaactcgtccccgct
ttcgaggctctgcgcgcgtggcgtgccgagcaggccaaggagcagggcgtcccggcgtac
gtcatcttccacgacgccacgctccgggagatcgcgacggtgtggcccgcctccgtggcg
gacctcgggggtatcagtggggtgggcgagaagaagctcgcgacgtacggggagggtgtg
gtcggggtgctcgccggcctgggcggcgcccccggaggggcgcccgcacccgcgcccgcg
cccgcacccgcggccgacgaggcggcggaggcgccggacccggactggccggagatggac
gcggagccggagccggaggactggatgtag
DBGET
integrated database retrieval system
