Streptomyces fagopyri: GFH48_21310
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Entry
GFH48_21310 CDS
T06986
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sfy
Streptomyces fagopyri
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfy03021
]
GFH48_21310
Transcription machinery [BR:
sfy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GFH48_21310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_31
MarR
HTH_24
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QFZ75468
UniProt:
A0A5Q0LET4
LinkDB
All DBs
Position
complement(4883778..4884707)
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AA seq
309 aa
AA seq
DB search
MSADQGSSKVLTLTKSDSEPDALHVVDIVDVVDVPALPAPDAVPAAPAAQAAPTSEAIDT
RTLSRSLFLRLAALGENSPERGYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIG
LIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELS
QKLDRSPTVAELASVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYED
TALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLA
QLREGLISD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacgctcacgaagagcgactcggagccc
gacgcgcttcacgtagtcgacatcgtcgacgtggtcgacgtaccggcccttccggccccg
gacgccgtcccggccgctccggccgcccaggccgctccgacctcggaagccatcgacacc
cgtaccctgtcccgctccctgttcctgcggctcgccgcactcggcgagaacagcccggag
cgcggctatgtgcgggacacgctcatcgaactgaacctcccgctcgtccggtacgcggcg
gcccgcttccgctcccgcaacgagccgatggaggacatcgtccaggtcggcaccatcggc
ctgatcaaggcgatcgaccgcttcgactgcgaacgcggggtggagttcccgacgttcgcg
atgcccaccgtcgtgggcgagatcaagcgcttcttccgcgacacgtcgtggtcggtccgg
gtgccgcgccgtctccaggaactgcggctcgccctcaccaaggccagcgacgagctgtcc
cagaagctcgaccgctccccgacggtcgccgaactcgcctccgtactcggcgtgtccgag
gaggacgtggtcgacggcctggccgtgggcaacgcgtacacggcgtcctcgctggactca
ccggcccccgaggacgacggcggcgagggctccctcgcggaccgcctcggctacgaggac
acggccctggagggcgtcgagtaccgcgagtcgctgaagccgctgctcgccaagctcccg
ccccgcgagcgccgcatcatcatgctgcgcttcttcgcgaacatgacccagtcgcagatc
ggcgaggaggtcggcatctcccagatgcacgtctcccggctgctcacccggaccctcgcc
cagctgcgcgaaggactcatctccgactga
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