Streptomyces fagopyri: GFH48_21315
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Entry
GFH48_21315 CDS
T06986
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sfy
Streptomyces fagopyri
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfy03021
]
GFH48_21315
Transcription machinery [BR:
sfy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GFH48_21315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
NirdL-like_HTH
HTH_3
MarR
DUF134
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QFZ78875
UniProt:
A0A5Q0LNT6
LinkDB
All DBs
Position
complement(4884952..4885866)
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AA seq
304 aa
AA seq
DB search
MEQPAPPQDRTPPQDRTPAQDRAPQGPPAPEQERAPEEEQAPFQGAAPERRRGADTRALT
QVLFGRLKTLEPGTAEHDHVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINA
IDRFDPERGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFG
RTPTTAEIAERLRITEEEVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALDGV
EHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSAN
RIEA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ctggaacagccggcccctccccaggaccggacgcctccccaggaccggacgccggcgcag
gaccgcgccccgcaggggcctccggcgccggagcaggagcgcgcaccggaggaggagcag
gccccgttccagggagccgcccccgagcgacgccgcggcgccgacacccgggccctcacc
caggtgctcttcgggcggctcaagacgctggagccgggcaccgcggagcacgaccacgta
cgcggggcgctcatcgaggcgaacctgccgctcgtccgctacgccgccgcccgcttccgc
agccgcaacgagcccatggaggacgtggtccaggtcgggaccatcgggctcatcaacgcg
atcgaccgcttcgacccggagcggggcgtgcagttcccgaccttcgcgatgccgacggtc
gtgggagagatcaagcggtacttccgtgacaacgtccgcacggtccacgtgccccgccgg
ctgcacgagctgtgggtgcaggtgaacagcgccaccgaggacctgacgacggccttcggg
cgcacgcccacgaccgccgagatcgccgagcggctgcgcatcaccgaggaggaggtgctg
tcctgcatcgaggccggacgctcgtaccacgcgacctccctggaggccgcccaggagggc
gacggactgccgggactgctcgaccggctcggctacgaggaccccgcgctcgacggggtg
gaacaccgcgacctcgtacgccaccttctcgtgcaactgcccgaacgcgaacagcggatc
ctcctgctgcgctactacagcaacctgacgcagtcacagatcagcgccgagctgggcgtt
tcccagatgcacgtgtcaaggctcctcgcccgcagcttcgcacgacttcgatccgcaaac
aggatcgaggcgtag
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