Streptomyces fagopyri: GFH48_23170
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Entry
GFH48_23170 CDS
T06986
Name
(GenBank) virulence factor
Organism
sfy
Streptomyces fagopyri
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ricin_B_lectin
RicinB_lectin_2
PT-HINT
Intein_splicing
Hint
CDtoxinA
Hom_end_hint
Motif
Other DBs
NCBI-ProteinID:
QFZ75774
UniProt:
A0A5Q0LG14
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All DBs
Position
5287941..5292890
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AA seq
1649 aa
AA seq
DB search
MPGSRRSGFFTPVVTSVAALAVLGGLAVQPDLLGRGADADPAAASYDWNVDTAAEQLRQD
QCLMADVLRLGGPSMATTAQDGLNQPADKLHTLADRKSWEKTPLATAYQADRDTAGKELD
ALHALRDGWQKPVVGLTTPAGFTETDFHWPPGSPGDGKEDFYGQTGLTKWTADRFWKNDG
DFYADSTPKADAATLRAVDDLGSPLYGKDPDPVGLPGGEWNRALAERDAFRWLHGAPGEN
AGADNARMFLAAGGFPRSAPQPGTAEYRIAVEDLKSRFAACAWRDPIDPDNVLGDVSGTA
ATEWQQEIASQATQRNQILSANKDATKSLAAGAKALGDLLGNSWVADHLARWQDYWSAGG
AGWVGDAPAVIEVHAAQGKCLDVEGAKKDNGTPVQLYTCNGSAAQEWKVYGDDRGLHLQN
VNSQKCLDVSNNNPANGTKIQIWSCVGSPAQTWEFNLRATGSLRNVGTDKCLDLHEYTNG
FNSWLYTCNGTGPQQFDVTPSGHTGTVPPKAQFDKAKAGITAVQTAAKKQLDVLKAQLAA
VKKAATASDTAERASYAIADTNGAPRGRGLLVGQQKAQVTQGAAAALEAMVRAGETAEAA
TRASGGDSQTIAERALAQAAQVKAEFRKRAAETAELQAKAAADAAKVHRDNAKKDKETAE
AKLTDALKAEGDAKAAAADAHAKRLAAEAEEKTAKAEKDNAAASRAEAAEHRKNAESEAT
KAKDAKDKAEASEKTAGDRRDDAVAAKNHAKAMRDDAWDAQQKADTARAKADAKDAYADS
LDSGDAATAARAAANDADKAADDAETAAAKARSEADAATRAAADADAAATRAEAAATRAR
SDADAAQAAKLKADAAVKTATSAVADAIKASQDASAEARAAVKLADEAQQHAEDAKTQAN
AANTEAGKALAAAAKAAGFAHVTAQAAVDAGEAAQQVADPANDAIQLGSSYVDTDSAAGL
VVLTGQNSKTIAEQQRAVADAHAKNAAAEAQAAKNIADQAKGDAKEAYQHAANAAQYAAD
ARTYSKDALGYAADAAKAAAAASASLARTIDYDQQATTDAAAADKAAGNAEGYAKDARDS
ADAAELDASAARSAATQAEQDAKEARSAADRADAAATEAEQAAKDADKYAKEAQQAAEHT
EDKKNGEQIQTGTILDAEGHIGNVFYVVDHYENIGDPETLSKTPACDDWKSRIVYTGDCT
IKARITYKAILDLYLCTADDLNPAYNICPSESAVYLGQQPSEKMTQEVTHTITIAEFNAN
IDPIDILFGSWIDCGKKIGSMLKISGSGGNWGGCGWAALDVASLFAGKIVRPIADAVLAV
DAALRTGIGVADALKALRTLRIDADALAGIERSARISEEFRVACETNSFPGSTEVLMADG
SRRAISRVGVGDRLKSMDPVTGRLQTRQVSDTFKHDTQRLVDITVADGGKLASTAGHRFY
VVNRGWTLVSDLHVGDRLRTPDGSVHPVTALLDRSGLTPRTVYDLTVDDLHTFFVLAGAT
PILVHNCKVALGWQRDGALDAWARLPGNKFTTFSIARAQDFAPLARKAIADPNVELHVNM
TGLERFGDFMDAAKRGLLAGEAGRATDYEMSLIARAVANGQRAWSSVRFYYPTGAGDVVE
LRKIDMPDLSKLGKLEPVDGGKFNYCHHC
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcacgaagatccggattcttcacccccgtcgtcacgtccgtggccgcgctg
gccgtcctcggcgggctggctgtccagcccgacctgctcggccgtggagcggacgccgac
ccggcggcagcctcgtacgactggaatgtggacacggctgccgagcagttgcggcaggac
cagtgcctcatggccgatgtgctgcggctgggtggcccgtccatggccacgaccgcgcag
gacggcctgaaccagcccgcggacaagcttcatacgctcgccgaccgcaagagctgggag
aagaccccgctcgccaccgcgtaccaggcggaccgggacacggcgggcaaggagctggac
gccctccatgctctccgggacggatggcagaagcctgtcgtcggtctgacgacaccggcc
ggtttcaccgaaaccgacttccactggcctccggggtccccgggagacggcaaggaggat
ttctacggccagaccggtctgacgaagtggaccgccgaccggttctggaagaacgacggc
gacttctacgccgactccacgcccaaggcggacgcggcgaccctcagggccgtcgacgac
ctgggtagccctctgtacggcaaggacccagacccggtcgggctgccgggcggcgagtgg
aaccgggccctcgccgagcgggacgcgttcagatggctgcacggggctccgggggagaac
gcgggcgcggacaacgcccgtatgttcctggcggcggggggatttccccgcagcgccccg
cagccgggcacggcggagtaccgcatcgcggtcgaggacctgaagtcccggttcgccgcg
tgcgcgtggcgtgacccgatcgatcccgacaacgtcctgggcgacgtctccggcacggcc
gccacggagtggcagcaggagatcgcctctcaggccacgcaacgcaaccagatcctctct
gccaacaaggacgccaccaagtccctggcggccggcgccaaggcgctgggtgacctgctg
ggcaattcgtgggtcgccgaccacctcgcgcgctggcaggactactggtccgcgggcggg
gccggctgggtcggcgacgcgccggcggtgatcgaggtgcacgccgcgcagggcaagtgc
ctcgacgtcgagggtgcgaagaaggacaacggcacccccgtccagctgtacacgtgcaac
ggttcggcggcgcaggagtggaaggtctacggcgacgaccggggactgcacctgcagaac
gtcaactcccagaagtgtctggacgtttcgaacaacaacccggccaacggcacgaagatc
cagatctggtcgtgtgtcggctccccggcgcagacgtgggagttcaacctccgcgccacc
ggcagcctgcgcaacgtcggcaccgacaagtgcctcgacctgcacgagtacacgaacggc
ttcaactcgtggctgtacacgtgcaacgggacggggccgcagcagttcgacgtcacgccc
tccgggcacaccggcactgtgccgcccaaggcccagttcgacaaggcgaaggccggcatc
acggccgttcagacggcggcgaagaagcagctcgacgtcctcaaggcccagctcgccgcc
gtgaagaaggccgccaccgcctcggacaccgccgagcgggcctcctacgccatcgccgac
accaacggcgcgccgcgggggcgcggtctgttggtcgggcagcagaaggctcaggtcacc
cagggtgcggcggccgcgctcgaggcgatggtgagggccggcgagaccgccgaggccgcc
acccgcgcctccggcggcgacagccagaccatcgcggagcgcgcgctcgcgcaggccgcc
caggtgaaggcggagttccgcaagagggccgccgagacggccgagttgcaggcgaaggcc
gctgccgatgccgcgaaggtgcaccgcgacaacgccaagaaggacaaggaaaccgcggag
gcgaagctcaccgacgcgctgaaggccgagggggacgccaaggcggccgccgccgacgcg
cacgccaagcggctcgccgccgaggccgaggagaagacggccaaggcggagaaggacaac
gccgccgccagccgcgccgaggccgccgagcaccgcaagaacgccgagtccgaggcgacg
aaggcgaaggacgccaaggacaaggcggaagcctccgagaagaccgccggggaccggcgc
gacgacgccgtcgcggccaagaaccatgccaaggcgatgcgcgacgacgcgtgggacgcc
cagcagaaggctgacaccgcgcgcgccaaggcggacgccaaggatgcctatgccgactcc
ctcgactccggtgacgcggcgaccgccgccagggccgccgccaacgacgcggacaaggcg
gccgacgacgccgaaacggcagcggccaaggcgcgctccgaggccgacgccgccacccgg
gcggcagccgacgcggacgccgcggccacccgtgccgaggccgccgccacacgggcccgc
tccgacgcggacgccgcacaggcggccaagctgaaggccgacgccgcggtgaagaccgcc
accagcgccgtcgccgacgccatcaaggcctcccaggacgcctccgccgaggccagagcc
gcggtcaagctcgccgacgaggcccagcagcacgccgaggacgccaagacccaggcgaac
gcggcgaacacagaagcgggcaaggcactcgcggccgcggcgaaggcggccgggttcgcg
cacgtcaccgcccaggcggccgtggacgcgggcgaagcggcccagcaggtcgccgatccc
gccaacgacgcgatccagctcggctcttcctacgtcgacaccgactccgccgccggcctc
gtcgtcctgaccggacagaactccaagacgatcgccgaacagcagcgggccgtcgccgac
gcccacgccaagaacgccgccgccgaggcccaggccgccaagaacatcgccgaccaggcc
aagggcgatgccaaggaggcctaccagcacgcggccaacgccgcccagtacgccgccgac
gcccgcacctactccaaggacgccctcggctacgccgccgacgccgccaaggccgcggcg
gcagcctcagcgtccctggcccgcaccatcgactacgaccagcaggccaccaccgacgca
gccgccgccgacaaggccgcaggcaacgccgagggctacgccaaggacgcccgcgacagc
gccgacgccgccgaactcgacgcctccgccgcccgctccgccgccacccaggccgaacag
gacgccaaggaggcccgcagcgccgccgaccgagccgacgccgccgccaccgaagccgaa
caagccgccaaggacgccgacaagtacgccaaagaggcgcaacaggccgccgaacatacc
gaggacaagaagaacggggagcagatccagaccggaacgatcctcgacgccgagggccac
atcggcaacgtgttctatgtcgtcgaccactacgagaacatcggcgacccggagaccctg
tccaagacgccggcctgcgacgactggaaaagcaggatcgtctacacgggcgactgcacc
atcaaggcgcgaatcacctacaaggcgatcctcgacctgtacctgtgcaccgcggatgac
ctcaacccggcgtacaacatctgcccctccgagtcggcggtgtacctcggccagcagccg
tccgagaagatgacccaagaggtcacacacaccatcacgatcgcggagttcaacgcgaac
atcgacccgatcgacatcctcttcggcagctggatcgactgcggcaagaagatcggctcg
atgctcaagatctcgggcagtggaggaaactggggcggatgcggctgggccgccctcgac
gtggcctccctgttcgcgggcaaaatcgttcggccgatcgccgacgcggtgctcgccgtg
gatgccgccctgcgcaccggcatcggagttgccgacgcgctgaaggcgttgcgcacgctg
cgcatcgacgcagacgcgttggcgggtatcgagcggtcggcgcgcatctccgaggagttc
cgcgtcgcctgtgagaccaacagcttccccggctccaccgaggtgctcatggcggacggc
tcacgccgtgccatcagtcgggtgggtgtgggagaccgtctcaagtccatggatccggtc
accggccggctgcagacgcggcaggtcagcgacaccttcaagcacgacacccagcggctg
gtggacatcaccgtcgccgacggggggaagctggccagcaccgccggccacaggttctat
gtggtgaaccgcgggtggacgctggtttccgacctgcacgtcggcgaccggctgcgcaca
ccggacggctcggtccacccggtgaccgccctcctcgaccgctcgggcctgactccgcgt
acggtctacgacctcaccgtcgacgacctgcacacgttcttcgtgctcgcgggcgccacc
ccgatccttgttcacaactgcaaggtcgccttgggctggcagagagatggggcgctcgac
gcgtgggctcggcttcccgggaacaagttcaccaccttctccatcgcgcgcgcgcaggat
ttcgctccgctggcgaggaaggccatcgccgacccgaacgtggagctgcacgtcaacatg
acgggactggaacgattcggagacttcatggacgctgccaagcgcggcctgctggctggt
gaagccggtcgtgccacagactacgagatgtccttgatcgcgagagccgtcgccaatggt
caacgcgcatggagttcggtgaggttctattatccgacgggtgccggtgacgtcgtggaa
ctcagaaagatagacatgccggatctgtcaaagttggggaaacttgagcccgtagacggg
ggcaaattcaactactgccaccactgctaa
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