KEGG   Streptomyces fagopyri: GFH48_24215
Entry
GFH48_24215       CDS       T06986                                 
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
sfy  Streptomyces fagopyri
Brite
KEGG Orthology (KO) [BR:sfy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfy03021]
    GFH48_24215
Transcription machinery [BR:sfy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GFH48_24215
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_Crp_2 MarR_2 HTH_23 HTH_24 HTH_3 DUF7343 Sigma70_ECF Apolipoprotein MarR DUF1492
Other DBs
NCBI-ProteinID: QFZ78921
UniProt: A0A5Q0LPF5
LinkDB
Position
complement(5524685..5525593)
AA seq 302 aa
MSPRLDASQTQRATSAPSTEHPDHDPAGHGADLAGLEGLPEIPPYDEVGPVDARALSKTL
FERLESLEEGTHDYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDR
FELSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQRLDRSP
TVGELAERLGITDDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGYEDHGLEGIEY
VESLKPLIAGLPPRDRQILSLRFVANMTQSEIGDELGISQMHVSRLLSRTLVRLRKGLTV
EE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtcaccccggctcgacgcatcgcagacccagagggcgacgtcggcaccctctacggaa
cacccggaccacgatcccgccggccacggcgcggacctcgcgggtctggaagggcttccg
gagatccccccgtacgacgaggtggggccggtggacgcacgagccctgtccaagacgctc
ttcgagcgcctggagtccctcgaagagggcacccacgactactcgtacgtccgcaacacg
ctcgtcgaactcaacctcgcgctggtgaagttcgccgcctcccgcttccgctcccgcagc
gagccgatggaggacatcatccaggtcggcacgatcggcctgatcaaggcgatcgaccgc
ttcgagctgagccgcggcgtcgaattccccaccttcgccatgccgaccatcatcggcgag
atcaagcgcttcttccgcgacacctcctggtccgtgcgcgtgccgcgcaggctgcaggaa
ctccggctcgacctggccaaggcgggcgacgaactcgcccagcggctcgaccggtcaccc
accgtgggcgagttggcggagcgcctgggcatcaccgacgacgaggtcgtcgagggcatg
gccgcctcgaacgcctacacggcgagctcgctggacgcccagcccgaggaggacgactcc
gagggcgcgctcgcggaccgcatcggctacgaggaccacgggctcgagggcatcgagtac
gtggagtccctcaagcccctgatcgccggcctgccgccgcgcgaccggcagatcctgtcg
ctgcgcttcgtcgccaacatgacccagtccgagatcggcgacgaactcggcatctcgcag
atgcacgtgtcacggctgctgtcgcggacgctggtgcggctgcgcaagggcctgacggtc
gaggagtga

DBGET integrated database retrieval system