Streptomyces fagopyri: GFH48_30710
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Entry
GFH48_30710 CDS
T06986
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy00040
Pentose and glucuronate interconversions
sfy01100
Metabolic pathways
sfy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GFH48_30710
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GFH48_30710
Enzymes [BR:
sfy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GFH48_30710
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GFIT
Motif
Pfam:
Pectate_lyase_4
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
QFZ77069
UniProt:
A0A5Q0LKR1
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Position
7012044..7013360
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AA seq
438 aa
AA seq
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MNTKKCHARVMMSLVGCTALVLAATGTTAQAQARPRDPGRQTLPAGDGWGSAGTGTTGGA
AADAAHVYTVTTWAGFKAALRNGSTAPKIIRVKGTIDAGAGGCDAFAAPGYDFDAYLRKY
APENWGYGTNLDAEPDDSPEGLRRASAARQDTAVKADVPANTTLVGVGRNAGFKGASLQI
KAVDNVIVRNLAFESPLDCFPQWDPTDTSAGNWNSEYDSAVVYGSTHVWLDHNTFTDGDH
PDSSLPTYFGRIYEQHDGELDIVRGADYVTASWNVFTDHDKTILIGNSDSAATAADDRGH
LKVTFHHNLFSNLLERAPRVRFGQVDSYNNHFVAGDGFSYSYGIGMESQLVAEHNAFTLP
SGISAATVLKKWKEAPLTAADNYVNGVATDLIAVHNAEIPAETLRSGAGWTPTLRTHVDR
PRAVPAIVDHRAGAGKVC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaagaaatgtcatgcgcgcgtcatgatgtcgctggtcggatgcaccgccctg
gtcctggccgccaccggcaccaccgcccaggcccaggcccggccccgcgaccccggccgc
cagaccctcccggccggcgacggctggggctccgccggcaccggcaccaccggcggcgcg
gccgccgacgccgcccacgtctacaccgtcaccacctgggccgggttcaaggcggcgctg
aggaacggctccaccgctccgaagatcatcagagtgaagggcaccatcgacgccggcgcc
gggggctgcgacgccttcgcagccccgggctacgacttcgacgcctatctgcgcaagtac
gcgccggagaactggggatacggcaccaacctggacgccgagccggacgacagccccgaa
ggactgcgccgcgcctccgccgcccgccaggacaccgccgtcaaggcggacgtcccggcg
aacaccacgctcgtcggcgtcggcaggaacgcgggcttcaagggcgcgagcctccagatc
aaggccgtggacaacgtcatcgtccgcaacctggccttcgagagcccgctcgactgcttc
ccgcagtgggacccgaccgacacctccgccggcaactggaactccgagtacgacagcgcg
gtggtctacgggtccacccacgtctggctcgaccacaacaccttcaccgacggggaccac
cccgacagctcgctgcccacgtacttcggccggatctacgaacagcacgacggcgaactg
gacatcgtcaggggcgcggactacgtgaccgcctcctggaacgtgttcaccgaccacgac
aagacgatcctgatcggcaacagcgacagcgccgccaccgccgcggacgaccggggtcac
ctcaaggtgaccttccaccacaacctgttctcgaacctgctcgagcgcgcgccgcgcgtc
cgcttcggccaggtggactcgtacaacaaccacttcgtcgcgggcgacggcttctcctac
agctacggcatcggcatggagtcccaactcgtcgccgagcacaacgcgttcaccctgccg
agcggtatcagcgcggcgaccgtcctgaagaagtggaaggaggcgccgctcaccgccgcg
gacaactacgtcaacggggtggcgacggacctgatcgccgtgcacaacgcggagatcccg
gccgagacactgcggtccggggccggctggacaccgaccctgcggacccacgtcgatcgg
ccacgggcggtgccggcgatcgtggaccaccgcgcgggcgccggcaaggtctgctga
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