Streptomyces fagopyri: GFH48_31010
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Entry
GFH48_31010 CDS
T06986
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy03030
DNA replication
sfy03430
Mismatch repair
sfy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFH48_31010
03430 Mismatch repair
GFH48_31010
03440 Homologous recombination
GFH48_31010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfy03032
]
GFH48_31010
03400 DNA repair and recombination proteins [BR:
sfy03400
]
GFH48_31010
Enzymes [BR:
sfy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFH48_31010
DNA replication proteins [BR:
sfy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFH48_31010
DNA repair and recombination proteins [BR:
sfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFH48_31010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QFZ77120
UniProt:
A0A5Q0LJ76
LinkDB
All DBs
Position
complement(7076236..7077270)
Genome browser
AA seq
344 aa
AA seq
DB search
MLEDLTTAASPAPWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTTV
NPERDPGPVWIHGLTSDVLEGAPLFPDIAEEFADRLAGRVLVAHNAVFDWSMIAREYARA
EREAPVRQRLCTIALSKELRLPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPSL
RAAAREGIRLPLLECRPLKEWSESPAGPRIGRQSGGYGSGSSGGGYGGGGGGGYPSGSWR
PSRKRPACPYPNPGRYETGEPLKQGMRVAFSGDTSVDRELLEDRAVEAGLHVATSLSRLT
SLLVTNDPDSSTSKVVKARQFGTPVIDEAAFGQLLRDVEPAPGK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagacctgacgaccgcagcgtccccagccccctggccggccgcgtatccgcag
gggtacgcggtcgtcgacgtggagaccaccggcctggcccgggacgaccggataatctcg
gccgccgtctaccggctggacgcgcgcggcgaggtcgaggaccactggtacacgacggtc
aacccggagcgggacccgggcccggtgtggatccacggtctgacgagcgacgtgctcgaa
ggcgccccgctcttcccggacatcgccgaggagttcgccgaccggctcgccggccgcgtc
ctcgtcgcgcacaacgccgtcttcgactggtcgatgatcgcgcgggagtacgcgcgcgcc
gagcgtgaggcgccggtgcgtcagcggctgtgcaccatcgcgctctccaaggagctgcgc
cttccgctgcccaaccacaagctggagtcgctggccgcgcacttcggtgtcgtgcagcag
cgcgcgcaccacgcgctggacgacgcgcgggtgctggcggaggcgttccggccgagcctg
cgggcggccgcccgcgaggggatccggctgccgttgctggagtgccggccgctcaaggag
tggtcggagagccccgcggggccccgcatcgggcggcagtccggcgggtacggcagcggg
tcctccgggggcgggtacgggggcggcggcgggggcggctatccgtcggggagttggcgc
ccctcacgcaaacgtcccgcatgcccctatcccaacccagggcgttacgaaacgggtgaa
ccgctcaagcagggcatgcgggtggcgttctccggggacacgtcggtcgaccgcgagctg
ctggaggaccgcgccgtagaggccggcctgcacgtggcgacgagcctgtcccggctgacc
agcctgctcgtcacgaacgatccggactccagcacgtccaaggtggtcaaggccagacag
ttcggcacgccggtgatcgacgaggccgcgttcggacagctgctgcgggacgtggaaccg
gcaccggggaagtga
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