Streptomyces fagopyri: GFH48_32940
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Entry
GFH48_32940 CDS
T06986
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GFH48_32940 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfy03400
]
GFH48_32940 (ruvB)
Enzymes [BR:
sfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFH48_32940 (ruvB)
DNA repair and recombination proteins [BR:
sfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GFH48_32940 (ruvB)
RecFOR pathway proteins
GFH48_32940 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
nSTAND3
DUF815
Mg_chelatase
AAA_14
AAA_3
RNA_helicase
TsaE
AAA_28
Sigma54_activ_2
Zeta_toxin
AAA_18
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QFZ77451
UniProt:
A0A5Q0LKM1
LinkDB
All DBs
Position
7502414..7503484
Genome browser
AA seq
356 aa
AA seq
DB search
MNWDDTTDETAADRLVGASADREDQAVEAALRPKDLDEFIGQEKVREQLDLVLRAARARG
ATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLQEGEVFFL
DEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPLR
DRFGFTAHMEFYEPAELQRVIHRSAHLLDVEIGAEGAAEIAGRSRGTPRIANRLLRRVRD
YAQVKADGIITREIAAAALKVYEVDARGLDRLDRGVLEALLKLFGGGPVGLSTLAVAVGE
ERETVEEVAEPFLVREGLLARTPRGRVATPAAWAHLGLTPPQRTMGGNGQGDLFGA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggacgacacgaccgacgagacagccgccgaccggctcgtcggcgcgtccgcc
gaccgtgaggaccaggccgtcgaggcggccctgcggcccaaggacctggacgagttcatc
ggccaggagaaggtccgcgagcagctcgacctcgtactgcgcgccgcccgcgcccgtggc
gccaccgccgaccacgtcctgctctccggcgcccccggcctcggcaagaccaccctctcg
atgatcatcgcggccgagatgggcgcccccatccgcatcaccagtggccccgccatccag
cacgccggggacctcgccgcgatcctctcctcgctccaggagggcgaggtgttcttcctg
gacgagatccatcgcatgtcccggcccgccgaggagatgctctacatggcgatggaggac
ttccgcgtcgacgtgatcgtcggcaagggcccgggggccaccgcgatccccctcgagctg
ccgccgttcaccctggtcggcgccaccacccgggcaggactgctgccgcccccgctgcgc
gaccgcttcggcttcaccgcgcacatggagttctacgagcccgccgagctccagcgcgtc
atccaccgctccgcacatctcctcgacgtcgagatcggcgccgagggcgcggccgagatc
gccggccgttcccggggcaccccccgtatcgccaaccgcctgctgcgccgggtccgggac
tacgcgcaggtcaaggccgacggcatcatcacccgcgagatcgccgccgccgcgctgaag
gtctacgaggtcgacgcccgaggtctcgaccgcctggaccgaggagtcctggaggccctg
ctcaagctcttcggcggcggcccggtcgggctgtccacgctcgcggtcgccgtgggagag
gagcgggagaccgtggaggaggtcgccgagcccttcctggtgcgcgagggactgctcgcc
cgtacgccccgtggccgcgtcgcgactccggcggcatgggcccatctcggtctcaccccg
ccccagcggaccatggggggaaacggacaaggggacctgttcggggcgtga
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