Streptomyces fagopyri: GFH48_33175
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Entry
GFH48_33175 CDS
T06986
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GFH48_33175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfy03400
]
GFH48_33175
Enzymes [BR:
sfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFH48_33175
DNA repair and recombination proteins [BR:
sfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GFH48_33175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DUF7815
Zn_ribbon_6
C1_1
Motif
Other DBs
NCBI-ProteinID:
QFZ77494
UniProt:
A0A5Q0LLL4
LinkDB
All DBs
Position
7553485..7555632
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AA seq
715 aa
AA seq
DB search
MSSADGRGEDGAQGAPPEQLALIREGVRQARAPKAKPRTWRGAALAKELPVARVLVDKGV
LHLDRYFDYAVPEELDAEAQPGVRVRVRFGAGRHRVRDGRREGGGLIDGFLVERLAESDY
AGPLAALAQVVSPEPVLGPELLGLARAVADRYAGSLADVLQLAVPPRNARAEGKPSPAPL
PAPAAPAAESWTRYARGAAFVESLARGGSPRAVWNALPGPEWAEELARAVGATLASGRGA
LVVVPDGRTVSRVDAALTSLLGEGRHAVLTAEAGPEKRYREWLAVRRGSVRAVVGTRAAM
FAPVRDLGLVVLWDDGDGSHSEPHAPQPHAREVLLLRAAHDTCAFLLGSWGCTVEAAQLV
ESGWALPLVAGRDRVRASAPLVRTVGDGDLARDEAARAARLPTLAWQVVREGLRHGPVLV
QVPRRGYVPRMACAQCRAPARCRHCAGPLEARDADALRCAWCGRDEAAWHCPECGGFRLR
AQVVGARRTAEELGRAFPAVPVRTSGREQVLDTVPGAPALVVSTPGAEPVAEGGYAAALL
LDGWAMLSRPDLRAGEEALRRWIGASALVRGQGAGGTVVVVAEPTLRPVQALVRWDPVGH
AVRELAERAELGFPPVSRMAAVSGTAEALAAFLAVVELPGDAEVLGPVPLPVTDAGRPRR
VGAPPAGERWERALVRVPPGSGAALAAALKAAQAARMARGGSEPVRIRIDPPDIG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgcggacgggcgaggagaggacggcgcacagggtgcgccgcccgaacagctc
gcgctgatccgtgagggcgtacggcaggccagggcaccgaaggcgaagccgcggacctgg
cgcggcgccgcgctcgccaaggagctgcccgtcgcgcgtgtgctcgtcgacaagggcgta
ctgcatctggaccggtacttcgactatgccgtgcccgaggagctcgacgccgaggcgcag
cccggcgtccgggtccgcgtgcggttcggggccgggcggcaccgggtgcgggacgggcgg
cgcgagggcgggggcctgatcgacggtttcctcgtcgagcggctggcggagtccgactac
gcgggaccgctcgccgcgctggcccaggtggtgtcccccgaaccggtcctcggccccgaa
ctgctgggactggcccgggcggtcgcggaccggtacgcgggcagcctcgccgacgtactg
cagctcgccgtgccgcctcgcaacgcgcgagccgaggggaagccctctccggcgcccctg
cccgctcccgccgcacccgcggcggagtcctggacgcggtacgcgcgaggggcggccttc
gtggagtcgctcgcccgcggcggctcaccgcgggcggtgtggaacgcgctgccggggccc
gaatgggccgaggagctggcgcgggcggtgggcgcgacgctcgcctcgggacgcggcgcg
ctcgtcgtcgtgccggacggccggaccgtctcccgtgtggacgcggcgctgacctcgttg
ctgggggaggggcggcacgcggtcctcacggccgaggccggacccgagaagcgctaccgg
gagtggctcgccgtgcggcgcgggtcggtacgggccgtggtggggacccgggccgccatg
ttcgcgccggtgcgggatctcgggctggtcgttctctgggacgacggggacggcagccac
agcgagccgcacgccccccagccgcacgcgcgggaggtgctgctgctgcgggcagcccat
gacacctgcgctttcctgctggggagctggggctgcacggtcgaggccgcgcagctggtc
gagagcggctgggcgctgccgctggtcgccgggcgcgaccgggtgagggcgagcgcgccg
ctcgtacggaccgtgggggacggggatctcgcacgggacgaggcggcacgggccgcccgt
ctgcccacgctggcctggcaggtggtcagggaggggctgcggcacgggccggtgctggtg
caggtgccgcggcgcggttacgtaccgcggatggcctgcgcgcagtgccgggctccggcc
cgctgccggcactgcgccggcccgctggaggcgcgggacgccgacgcgctgcggtgcgcg
tggtgcgggcgggacgaggcggcctggcactgccccgagtgcggtggtttccggctgcgg
gcgcaggtcgtgggcgcccgccggaccgccgaggagctggggcgcgccttcccggcggtg
ccggtccggacgtcggggcgcgagcaggtgctggacaccgtgccgggggcacccgcgctg
gtcgtgtccacgcccggcgccgaacccgtcgcggagggcgggtacgcggcggcactgctg
ctcgacggctgggcgatgctgtcgcgacccgatctgcgggccggtgaggaggcgctgcgg
cgctggatcggggcctcggcgctggtgcgcgggcagggggcgggcggcaccgtggtcgtc
gtcgctgagccgaccctgcgtcccgtgcaggcgctcgtacggtgggaccccgtcgggcac
gcggtgcgtgagctcgccgagcgggccgagctgggatttccgccggtgtcacggatggcg
gcggtctcgggtaccgcggaggcgctcgccgcgtttctcgccgtggtcgaactgccgggc
gacgccgaggtgttggggccggttccgctgcccgtcaccgatgccgggcgaccgcggcgg
gtgggggcgccgcccgcgggggagcgctgggagcgcgcgctcgtccgggtacccccgggg
agcggcgccgcgctggcggccgcgctgaaagccgcgcaggcggcacggatggcgcgtggg
gggagtgagcccgtacggatccggatcgatccgccggacatcgggtga
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