Streptomyces fagopyri: GFH48_34060
Help
Entry
GFH48_34060 CDS
T06986
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sfy
Streptomyces fagopyri
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfy03400
]
GFH48_34060 (sbcD)
DNA repair and recombination proteins [BR:
sfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GFH48_34060 (sbcD)
Archaeal homologous recombinant proteins
GFH48_34060 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QFZ77653
UniProt:
A0A5Q0LKR2
LinkDB
All DBs
Position
7753927..7755090
Genome browser
AA seq
387 aa
AA seq
DB search
MRLLHTSDWHLGRAFHRVTMLGAQAEFIGHLVTTVRERGVDAVVVSGDVYDRAVPPLAAV
ELFDDALHRLADLGVPTVMISGNHDSARRLGVGAGLIGRAGIHLRTEPSASGTPVVLADA
HGDVALYGLPYLEPALVKDEFGVDRAGHETVLAAAMDRVRADLATRPPGTRSVVLAHAFV
TGGAASDSERDITVGGVAAVPAGVFDGVDYVALGHLHGSQTITERVRYSGSPLPYSFSEA
DHRKSMWLVDLGPDGSLDAERVDCPVPRALARVRGRLEDLLADPELARHEEAWVEATLTD
PARPAEPMARLTERFPHTLSLVFDPERAPEDPDVSYARRLAGRSEQQIAEDFVAHVRGTG
PDPREQAVLRDAFDAVHADEAVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttctgcacacgtccgactggcacctcggccgggctttccaccgggtgacgatg
ctcggtgcccaggccgagttcatcggccatctcgtcacgaccgtgcgtgagcgcggcgtc
gacgcggtggtcgtgtccggggacgtgtacgaccgggcggtcccgccgctggccgccgtc
gagctcttcgacgacgcgctgcaccggctggccgacctcggcgtgcccacggtgatgatc
tccgggaaccacgactcggcgcgccggctcggcgtcggggccgggctgatcgggcgggcc
ggcatccacctgcggaccgaaccctcggcctccggcacgcccgtggtcctcgccgacgcc
cacggcgacgtcgccctctacggcctgccgtacctcgaaccggccctggtgaaggacgag
ttcggggtggacagggccggacacgagaccgtgctcgccgccgccatggaccgggtccgc
gccgacctcgccacacgcccgccgggcacccgctccgtcgtcctcgcccacgccttcgtc
accggaggcgcggccagcgacagcgagcgcgacatcaccgtcggcggtgtcgccgcggtc
cccgccggggtcttcgacggagtggactacgtggccctgggccatctgcacggcagccag
accatcaccgagcgggtccgctactccgggtccccgctgccctactcgttctccgaggcg
gaccaccgcaagagcatgtggctggtggacctgggcccggacggctcgctcgacgccgag
cgggtcgactgccccgtaccccgggcactcgcccgcgtccgggggcggctggaggacctg
ctcgccgacccggagctcgcccgtcacgaggaggcgtgggtcgaggccaccctcaccgat
ccggcgcgccccgccgaaccgatggcccggctgaccgagcggttcccgcacaccctcagc
ctggtcttcgaccccgagcgggctcccgaggacccggacgtctcgtacgcgcgccgactg
gcgggccgcagcgaacagcagatcgccgaggacttcgtggcccatgtgcgcggcacgggc
cccgacccccgggaacaggccgtgctgcgggacgcgttcgacgccgtccacgccgacgag
gccgtacgggaggtcgcccggtga
DBGET
integrated database retrieval system
