Spiroplasma floricola: SFLOR_v1c04170
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Entry
SFLOR_v1c04170 CDS
T05283
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sfz
Spiroplasma floricola
Brite
KEGG Orthology (KO) [BR:
sfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfz03019
]
SFLOR_v1c04170 (cshB)
03009 Ribosome biogenesis [BR:
sfz03009
]
SFLOR_v1c04170 (cshB)
Enzymes [BR:
sfz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SFLOR_v1c04170 (cshB)
Messenger RNA biogenesis [BR:
sfz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SFLOR_v1c04170 (cshB)
Ribosome biogenesis [BR:
sfz03009
]
Prokaryotic type
rRNA helicases
SFLOR_v1c04170 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Flavi_DEAD
PhoH
Motif
Other DBs
NCBI-ProteinID:
AUB31469
UniProt:
A0A2K8SDD4
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All DBs
Position
461688..463055
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AA seq
455 aa
AA seq
DB search
MKFSDFGFKKFINDALEEISFIYPTKIQEKVIPLIKKHKSVIAQSHTGTGKTHSFLLPIL
NNINYDENNKIQCLIITPTRELARQIYENTKELLKFNNKGNVALFVGGDDIEKSIQNVKT
KQPTIVIGTPTRLKKMYEEGNLFITTAKYVVIDECDMIFDLGFIEEVDLILSKMSKDVNI
SLFSATINNGLKPFLKKYLSNSIFIENIDSNPTNKNIEHILIWTKNKENKDVLKIITNSI
NPYVCMVFLNKKDQIKEIISWLNEFGIKNVGEIHGDLDSRQRTNMQKRIQSGEFKWIVAS
DVAARGIDIDGVSHIISIDLPKDLDYYIHRSGRTGRNQYSGQSYVLFNSTNQHQIDELKS
KGILFTNFKLVNNQLQEVNTVKKKKEFNADLPVNIETKKIIDKYKGKKVKPGYKKRRKAE
IDQIKKEIRRKHIKESIAKIKKDKYKKRREELFES
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcagattttggatttaaaaaatttataaatgatgcattagaagaaataagt
tttatttatcctacaaagattcaagaaaaagttattcctcttataaaaaaacataagtca
gtaatagcacaatcacatacaggaactggaaaaactcattcttttttattgcctatatta
aacaatattaattatgatgaaaacaataaaatacaatgtctaattattactccaacaaga
gaattggctagacaaatttatgaaaatactaaagaacttttaaaattcaataataaagga
aatgttgctttgtttgttggtggagatgatattgaaaaatcaattcaaaatgttaaaaca
aaacaaccaacaattgttataggaactcccacaagattaaaaaaaatgtatgaagagggt
aatttatttataacaactgcaaaatatgttgttattgatgaatgtgatatgatttttgat
cttggttttattgaagaagtagatttaatactttcaaaaatgagcaaagatgttaatata
tctttattttctgcaaccattaataatggtttaaaaccttttttgaaaaagtatctttca
aactctatttttattgaaaatattgattctaatccgacaaataaaaatatagaacatatt
cttatttgaacaaaaaataaagaaaataaagatgtattgaaaataataacaaattcaata
aatccctatgtttgtatggttttcttaaataagaaagatcaaataaaagaaataataagt
tgattaaatgaatttggaattaaaaatgtaggagaaatacatggtgatttagattcaaga
caaagaacaaatatgcaaaaaagaattcaaagcggagaatttaaatggattgtagcttca
gatgttgcagctagaggtattgatattgatggtgtaagtcatattatttcaattgatctg
ccaaaagatcttgattactatattcatagaagtggtagaacaggaagaaaccaatattct
ggtcaaagttatgttttatttaactcaacaaaccaacatcaaattgatgagttaaaatca
aagggaatcttatttacaaactttaaacttgtaaataatcaattacaagaagtaaataca
gttaaaaagaaaaaagaatttaatgctgatttaccagttaatattgaaactaaaaaaatt
attgataaatataaaggtaaaaaagttaaaccaggatataaaaaacgaagaaaagcagag
attgatcagattaaaaaagaaattagaagaaaacatattaaagaatcaattgcaaaaata
aaaaaggataaatataaaaaacgtagagaagagctatttgaaagttaa
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