Streptococcus gallolyticus UCN34: GALLO_0413
Help
Entry
GALLO_0413 CDS
T01171
Name
(GenBank) putative ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sga
Streptococcus gallolyticus UCN34
Brite
KEGG Orthology (KO) [BR:
sga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sga03019
]
GALLO_0413
03009 Ribosome biogenesis [BR:
sga03009
]
GALLO_0413
Enzymes [BR:
sga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GALLO_0413
Messenger RNA biogenesis [BR:
sga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GALLO_0413
Ribosome biogenesis [BR:
sga03009
]
Prokaryotic type
rRNA helicases
GALLO_0413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SWI2_SNF2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
CBI12905
UniProt:
A0AA36JWD2
LinkDB
All DBs
Position
444197..445540
Genome browser
AA seq
447 aa
AA seq
DB search
MSFNDFNFKPYIREALAELKFTNPTEVQQKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF
EKLDENSNNVQVVITAPSRELATQIYQATKQIAEKSETEIRVANYVGGTDKLRQIEKLQS
SQPHIVIGTPGRIYDLVKSGDLEIYKAHTFVVDEADMTLDMGFLDTVDKIAGTLPKDVQI
LVFSATIPQKLQPFLKKYLTNPVMEKIKTTTVIADTIDNWLVSTKGRDKNAQILEITKAL
NPYLAMIFVNTKERADELHSYLVSNGLKVAKIHGDIPPRERKRTMNQIKKLSYEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLNGIAITLYKPSDDSDIRELEKM
GIKFVPKMLKNGEFQDTYDRDRRANREKSYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKV
DEKRKRERRAANRAKGRAERKARKQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaacgattttaattttaagccctacattcgtgaggcgcttgcagagcttaaa
ttcacaaatccgacagaagtgcaacaaaagttaattcccgttgtgcgttctggtcgtgat
ttggttggagaatctaaaactggttcaggaaaaacgcacactttcttgttgccgattttt
gaaaaattagatgaaaacagcaataatgttcaggtggttatcacagcaccaagccgtgag
ttggcaacgcaaatttatcaagcaaccaaacaaattgctgaaaaatctgaaacagaaatt
cgtgtggcaaattacgttggtggtacagataaactacgtcaaattgaaaaattgcaatca
tctcagccacacatcgtcattggtacacctggtcgtatctatgatttggtcaaatcaggt
gatttggaaatttataaagctcatacctttgttgttgatgaagctgatatgacgcttgat
atgggattccttgatacggtggataagattgcagggacattgccaaaagatgttcaaatt
ttggttttctcagcgactattccacaaaaattgcaacccttcttgaaaaaatatttgaca
aatccagtcatggaaaaaatcaagacaactactgttatcgcagatacaattgataattgg
ttggtttcaactaagggacgtgataaaaatgcgcaaatcttggaaatcactaaagcccta
aatccatatcttgccatgatttttgtaaacacaaaagaacgtgcagatgagttgcatagc
tatcttgtgtcaaatggattgaaagtggcaaaaattcacggcgatattcctccacgtgaa
cgtaaacgcaccatgaaccaaatcaaaaaactgtcatacgaatacattgtggcgacagat
ttggcagcgcgtgggattgatattgaaggagttagtcatgttatcaatgatgctattccg
caagatttatcattctttgtgcaccgtgttggacgtacaggacgtaatggtttaaatggt
attgcgattacgctttacaaaccaagtgacgattctgatattcgtgaacttgaaaaaatg
gggattaaatttgtccctaaaatgcttaaaaatggtgaatttcaagatacttacgaccgt
gaccgtcgagctaaccgcgaaaaatcttaccaaaaattagatactgaaatgattggtttg
gttaaaaagaaaaagaaaaaaatcaaaccaggctacaagaaaaaaattcaatggaaagtt
gatgaaaaacgcaaacgtgaacgccgtgccgctaatcgtgccaaaggacgtgctgaacgt
aaagcaagaaaacaaactttctag
DBGET
integrated database retrieval system
