Streptococcus gallolyticus UCN34: GALLO_0487
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Entry
GALLO_0487 CDS
T01171
Name
(GenBank) putative HAD-superfamily hydrolase / phosphatase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sga
Streptococcus gallolyticus UCN34
Pathway
sga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GALLO_0487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sga03019
]
GALLO_0487
Messenger RNA biogenesis [BR:
sga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GALLO_0487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
ATP-synt_B
KH_KhpA-B
dUTPase
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
CBI12979
UniProt:
A0AA36NQ49
LinkDB
All DBs
Position
509574..511181
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AA seq
535 aa
AA seq
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MPNIIILIVFALIGLIVGYVLISVRLKSAKEAAELTLLNAEQDAVNLRGQAELEAEHIRK
TAERESKSHRKELLIEAKEEARKYREEIEKEFKSERQELKQMETRLTERASSLDRKDENL
TSKEKVLDSKEQSLTDKSRHINEREKQIGELEEQKKAELERVALMTIAEAREIILTETET
NLTHEIATRIKDAEREVRDKSSKLAKNILAQAMQRMAGEYVTEQTITTVHLPDDSMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLEALIQDGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAFEIGALNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
MAGILAGELGENVTLARRAGFLHDMGKAVDREVEGSHVEIGTELARKYKENPIVVNAIAS
HHGDVEPESVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIATSFDGVQNSYALQ
AGREIRIMVQPTKVSDDEVTILAHKVREKIEGNLDYPGNIKVTVIRELRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatattattatcttgattgtttttgccctcattggtttgatagttggttatgtg
ctgatttcagttagacttaagtctgcgaaagaagcggcagaactcactcttttaaatgca
gaacaagacgctgttaatctacgtggtcaagcggagttagaagctgagcacatcagaaaa
acagctgaacgagaaagtaaatcacatcgtaaagaattactaatcgaggcaaaagaagag
gctagaaaatatcgtgaagagattgaaaaagaatttaaatctgaaaggcaagagttaaaa
caaatggaaactcgtttaacagaacgagcttcttctcttgaccgcaaggatgaaaaccta
accagcaaggaaaaagtgttggatagtaaagaacaaagtctaaccgataaatctagacac
attaatgagcgtgaaaaacaaatcggagaactagaagaacagaaaaaagcagaacttgaa
cgcgtagcgctcatgacgattgctgaagcgcgtgaaattattttaacggaaacggaaact
aatttgacgcacgaaattgctactcgtatcaaggatgctgaacgtgaagtccgagataaa
tctagcaaacttgctaaaaatattctcgcgcaagctatgcaacgtatggcaggtgaatat
gttactgaacaaactattacaacagttcacttaccagacgatagcatgaaaggtcgtatc
attggacgtgaaggacgtaatatccgcacacttgaaagtttgacaggaattgacgttatc
attgatgatacccctgaagttgttgttctttcaggatttgatccgattcgtcgtgaaatc
gctcgaatgactttggaagctttgattcaggacggacgtattcacccagctcgtatcgag
gaattggttgaaaaaaatcgtttggaaatggataaccgtattcgtgaatatggtgaggct
gctgcatttgaaattggagcccttaacttgcaccctgatttgattaaaattatgggacgc
ctgcaatttagaacatcatacggtcaaaacgtcttacgtcattctgtcgaagttggtaag
atggcaggtattctcgcaggggaacttggtgaaaatgtgacgcttgctcgtcgtgcaggt
ttcttgcatgatatggggaaagccgttgaccgtgaggttgagggaagccacgttgaaatc
ggaacggaacttgctcgtaaatacaaggaaaatccgattgtcgttaatgccattgctagt
caccacggtgatgtagaaccagaaagtgttatcgctgtgattgttgcagctgcagatgcg
cttagctcagctcgcccaggtgctcgtaacgaatcaatggaaaattacatcaaacgcctt
cgtgatttggaagaaattgccacaagctttgatggtgtccaaaatagctatgctttgcaa
gcaggacgtgaaatccgcatcatggtgcaaccaactaaagtttctgatgatgaggtaaca
atcttagctcacaaagttcgtgaaaaaattgaaggtaatcttgattacccaggtaacatt
aaagttactgttatccgtgaacttcgtgcagttgactatgcaaaataa
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