Streptococcus gallolyticus UCN34: GALLO_0813
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Entry
GALLO_0813 CDS
T01171
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sga
Streptococcus gallolyticus UCN34
Pathway
sga03410
Base excision repair
sga03430
Mismatch repair
sga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GALLO_0813 (recJ)
03430 Mismatch repair
GALLO_0813 (recJ)
03440 Homologous recombination
GALLO_0813 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sga03400
]
GALLO_0813 (recJ)
DNA repair and recombination proteins [BR:
sga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GALLO_0813 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GALLO_0813 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GALLO_0813 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
TPP_enzyme_N
DUF218
Usp
Motif
Other DBs
NCBI-ProteinID:
CBI13305
UniProt:
A0AA36JX48
LinkDB
All DBs
Position
860409..862616
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AA seq
735 aa
AA seq
DB search
MITSKYNWKNIEKGPDNGFFELTKKEKLTELASQILYSRGVDTAEKLTQFLSTDLSQLHD
PYLLHDMDKAVERIRQAIENYEQILVYGDYDADGMTSASIMKEALEMLGAEAQVYLPNRF
TDGYGPNESVYKYFIEQQNVSLIITVDNGVAGHEAIAYAQSQGVDVIVTDHHGLPAELPE
AFAIVHPEHPEADYPFKYLAGCGVAFKVACALLESIPTEMLDLVAIGTIADMVSLTDENR
IMVKVGLEILKQTERIGLIELMKVSDVDMADVNEETVGFKIAPQLNALGRLDDPNPAVEL
LTGFDDEEAHNIAKMINAKNEERKEIVQEIFDEAMSMVDLEKPVQVLAKEGWHPGVLGIV
AGRILEQIAQPVIVLNIEDGLAKGSARSIEAINIFHALDEHRGLFEAFGGHAGAAGMTLV
TENLDKLSQVLCDYIAENDIDLSQKKELVIDEVLELSEIDLDTVHSLEKLEPFGMDNPKP
VFEIKDFVVKQARTMGQNGAHLKLKIAQGTTAIDLVAFNQGHLAQEFQQAQNLCLATTLS
INKWNGQTTVQLMLEDARVEGVQLIDIRSKTASLPERVPVLAEDSTANEVVVLDIPDKAE
ELKSLFVGRHFEAVYFKNHIKRAYYLTGYGTRDQFAKLYKTIYQFPEFDVRYKLKDLSQY
LNIPDILLVKMIQIFDELDFVTITDGVMVVNKDAQKRSISESQIYQDLKQQVKFQELMAL
GTPQEIYDWLTDEDD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgataacaagtaaatacaattggaaaaatattgaaaaagggccagataatggctttttt
gagctaacaaaaaaagaaaaactaacagaattagctagtcagattctttatagccgaggt
gttgatacggcagaaaaattgactcaatttttatcaacggatttgtcacaattgcatgac
ccttaccttttacatgacatggataaagcggttgagcgtattcgccaagccattgagaac
tacgagcaaattttggtttatggtgactatgatgctgacggaatgactagtgccagtatt
atgaaagaagcccttgaaatgttaggcgctgaagctcaagtttatctgccaaatcgtttc
acagatggttatggtcccaatgagtcggtctataaatatttcattgagcagcaaaacgtt
tctttgattatcacggtggacaatggcgtagcagggcatgaagcgattgcctacgcacaa
agtcagggggtagatgtcattgtgacagatcaccacggtttgccagcagagctaccagaa
gcatttgcgattgtgcacccagaacacccagaagctgattatccgttcaaatatctggct
ggctgtggcgttgctttcaaagttgcttgtgctttgctagaatctattccgacagaaatg
cttgatctggtggcaattggaacaattgctgatatggtgagtttgactgatgaaaaccgt
attatggttaaagtcggacttgaaattctgaaacaaaccgaacgcattggtctgattgaa
ttgatgaaagtctcagacgtggatatggcagatgtcaatgaagaaacggttggtttcaaa
attgctccgcagctaaatgcacttggtcgcctagatgacccaaatcctgctgtcgaatta
ttgactggctttgatgacgaagaagcgcataacattgccaagatgattaatgctaaaaac
gaagaacgcaaggaaattgttcaggaaatcttcgatgaagccatgagcatggttgatttg
gaaaagccagtgcaagtattggctaaagaaggttggcacccaggcgttttaggaattgtc
gcagggcgtattttagaacaaatcgcgcagccagtgattgttttaaatatcgaagatggg
cttgctaaaggttcagccagaagtattgaggccattaatattttccatgcccttgatgag
caccgtggcttatttgaagcctttggtggacacgctggcgctgctggaatgaccttggtg
actgaaaatcttgataaattatcacaagttttgtgtgattatattgctgaaaatgatatt
gacttatcacagaaaaaagagcttgttattgatgaggttctggagctatcagagattgac
cttgataccgtgcacagtcttgaaaaattggaaccatttggcatggacaatccaaaacca
gtctttgaaattaaagattttgtggtgaaacaagcacgcaccatgggacaaaatggagcg
catttaaaattaaaaattgcccaaggcacaacggcaattgaccttgttgcctttaatcaa
ggacatctggcgcaggaatttcaacaagcgcaaaatctttgccttgcaacgaccttatcg
attaataagtggaatgggcaaacgactgttcaattaatgttggaagatgcgcgtgttgag
ggtgttcagttgattgatattcgctccaaaacagctagccttccagaacgtgttccagta
ttggctgaagatagcacggcaaatgaagttgtggtgttagacattcctgataaggctgaa
gaattgaaatcactctttgtcggtcgtcattttgaagccgtttattttaaaaatcatatt
aaacgtgcttattatctgacaggctatggcacacgtgaccaatttgctaagctttataaa
actatctatcaattcccagaatttgatgtccgctacaagttgaaagatttgagtcaatac
cttaatatccctgatattttactcgttaaaatgattcagatttttgatgaattagatttt
gtaaccatcacagatggtgttatggtcgtcaacaaagatgcccagaaacgcagtatttca
gaaagccaaatctaccaagacctcaaacaacaagttaaattccaagagttaatggcactc
ggaaccccacaagaaatttacgattggctgactgatgaagatgactaa
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