Streptococcus gallolyticus UCN34: GALLO_0858
Help
Entry
GALLO_0858 CDS
T01171
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sga
Streptococcus gallolyticus UCN34
Pathway
sga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GALLO_0858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sga03019
]
GALLO_0858
Messenger RNA biogenesis [BR:
sga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GALLO_0858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Regulator_TrmB
Motif
Other DBs
NCBI-ProteinID:
CBI13350
UniProt:
A0AA36NQ10
LinkDB
All DBs
Position
905029..906690
Genome browser
AA seq
553 aa
AA seq
DB search
MSDIKIIALGGVRENAKNLYVVEVNDSIFILDAGLKYPENEQLGVDEVIPNIDYLVENKK
RVQGIFLTHGHADAIGALPYILSEFKAPVFGSPLTIELAKLFVKKNNNVKKFNNFHVIDA
ETEIEFADATISFFKTTHSVPESLGIVVGTDEGNIVYTGDFKFDQAARKYYRTDLSRLTE
IGREGVLALLSDSANATSNVLTASESEVAAEMDSIIADAEGRVIIAAVASNLVRIQQVFD
SAADYGRRVVLTGFDAENIVRTAIRMKRLRLVDEKLIVKPKDMHKFEDHELIILEAGRMG
EPINGLQKMALRRHRYVQIKEGDLVYIVTTPSLSKEAAVARVENLIYKAGGVVKLITQTM
NVSGHANARDLQLMINLLQPKYLFPVQGEYRNLATHAELAQEVGMYPENIYIVKRGDVMV
LGKDGFNHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKKIVSK
AKIHTRGFVYVKKSRDILRESAELVNQTVENYLAQDSFDWGELKGAVRDDVAKFLFDQTK
RRPAILPVVMEVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattaaaattattgcccttggaggtgtgcgcgaaaatgcgaaaaacctctat
gtggtagaagttaatgactctattttcattttggatgctggacttaaatatcctgaaaat
gaacaattgggtgtagatgaagtcattccaaatattgactacctagttgaaaataaaaaa
cgtgtgcaaggaattttcttgacgcatgggcacgcagacgctatcggagctttgccttat
attctatcggaatttaaagcgccagtgtttggctcaccgttgacaattgagttagcgaag
ctttttgttaagaaaaataacaatgttaaaaaatttaataatttccatgttattgacgca
gaaactgaaattgaatttgcagatgcgacaatttcattctttaaaacaactcactcagtt
cctgaaagtttggggattgttgttggtacagatgagggaaatattgtttacacaggcgac
ttcaaatttgaccaagctgcccgtaaatattaccgtacagacttgtctcgtttgactgaa
attgggcgtgaaggcgttttagctcttctttctgattctgctaatgcgacaagtaatgtt
ctgacagctagcgaatcagaagttgctgctgaaatggatagcattatcgcagatgctgaa
ggtcgtgtgattattgcagccgtagcttctaacttggttcgtattcagcaggtatttgat
tcagccgcagactatggtcgtcgtgttgttttaactggttttgacgctgaaaatattgtc
cgcacagccattcgtatgaaacgcttgcgtttggttgatgaaaaattgattgtcaaacca
aaagacatgcacaagtttgaagaccatgaattgattattcttgaagctggtcgtatgggg
gaaccgattaatggtttgcaaaaaatggcgcttagacgtcaccgttatgtgcaaattaag
gaaggcgaccttgtttacatcgttacaacgccaagtctttcaaaagaagcagctgttgcg
cgtgtcgaaaatttgatttacaaagctggcggtgtggttaaacttatcacacaaacaatg
aatgtttcaggtcatgccaatgcgcgtgatttgcagttgatgattaatcttcttcaacca
aaatatttgttcccagttcaaggagaataccgtaacttggcaacgcatgctgagttagcg
caagaagttggtatgtatccagaaaatatttacatcgtcaaacgtggtgatgtcatggtt
cttggtaaagatggctttaatcacgagggaagtgtcccagctggtgatgtgatgattgac
ggaaatgcgattggtgacgttggtaatattgttcttcgtgaccgcaaagtcttgtcagaa
gatggtattttcattgttgccttgactgttaataaacgcgaaaagaaaatcgtttcaaaa
gctaaaattcacacacgtggttttgtctatgttaagaaaagccgtgatattctgcgtgaa
tcagctgaattggttaatcaaactgttgaaaattacttggcacaagatagctttgactgg
ggtgaattgaaaggagctgtccgcgatgatgtggcaaaattccttttcgaccaaaccaaa
cgtcgccctgctattttaccagtagttatggaagtgagataa
DBGET
integrated database retrieval system