KEGG   Streptococcus gallolyticus UCN34: GALLO_0858
Entry
GALLO_0858        CDS       T01171                                 
Name
(GenBank) conserved hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sga  Streptococcus gallolyticus UCN34
Pathway
sga03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GALLO_0858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sga03019]
    GALLO_0858
Messenger RNA biogenesis [BR:sga03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GALLO_0858
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Regulator_TrmB
Other DBs
NCBI-ProteinID: CBI13350
UniProt: A0AA36NQ10
LinkDB
Position
905029..906690
AA seq 553 aa
MSDIKIIALGGVRENAKNLYVVEVNDSIFILDAGLKYPENEQLGVDEVIPNIDYLVENKK
RVQGIFLTHGHADAIGALPYILSEFKAPVFGSPLTIELAKLFVKKNNNVKKFNNFHVIDA
ETEIEFADATISFFKTTHSVPESLGIVVGTDEGNIVYTGDFKFDQAARKYYRTDLSRLTE
IGREGVLALLSDSANATSNVLTASESEVAAEMDSIIADAEGRVIIAAVASNLVRIQQVFD
SAADYGRRVVLTGFDAENIVRTAIRMKRLRLVDEKLIVKPKDMHKFEDHELIILEAGRMG
EPINGLQKMALRRHRYVQIKEGDLVYIVTTPSLSKEAAVARVENLIYKAGGVVKLITQTM
NVSGHANARDLQLMINLLQPKYLFPVQGEYRNLATHAELAQEVGMYPENIYIVKRGDVMV
LGKDGFNHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKKIVSK
AKIHTRGFVYVKKSRDILRESAELVNQTVENYLAQDSFDWGELKGAVRDDVAKFLFDQTK
RRPAILPVVMEVR
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgagcgatattaaaattattgcccttggaggtgtgcgcgaaaatgcgaaaaacctctat
gtggtagaagttaatgactctattttcattttggatgctggacttaaatatcctgaaaat
gaacaattgggtgtagatgaagtcattccaaatattgactacctagttgaaaataaaaaa
cgtgtgcaaggaattttcttgacgcatgggcacgcagacgctatcggagctttgccttat
attctatcggaatttaaagcgccagtgtttggctcaccgttgacaattgagttagcgaag
ctttttgttaagaaaaataacaatgttaaaaaatttaataatttccatgttattgacgca
gaaactgaaattgaatttgcagatgcgacaatttcattctttaaaacaactcactcagtt
cctgaaagtttggggattgttgttggtacagatgagggaaatattgtttacacaggcgac
ttcaaatttgaccaagctgcccgtaaatattaccgtacagacttgtctcgtttgactgaa
attgggcgtgaaggcgttttagctcttctttctgattctgctaatgcgacaagtaatgtt
ctgacagctagcgaatcagaagttgctgctgaaatggatagcattatcgcagatgctgaa
ggtcgtgtgattattgcagccgtagcttctaacttggttcgtattcagcaggtatttgat
tcagccgcagactatggtcgtcgtgttgttttaactggttttgacgctgaaaatattgtc
cgcacagccattcgtatgaaacgcttgcgtttggttgatgaaaaattgattgtcaaacca
aaagacatgcacaagtttgaagaccatgaattgattattcttgaagctggtcgtatgggg
gaaccgattaatggtttgcaaaaaatggcgcttagacgtcaccgttatgtgcaaattaag
gaaggcgaccttgtttacatcgttacaacgccaagtctttcaaaagaagcagctgttgcg
cgtgtcgaaaatttgatttacaaagctggcggtgtggttaaacttatcacacaaacaatg
aatgtttcaggtcatgccaatgcgcgtgatttgcagttgatgattaatcttcttcaacca
aaatatttgttcccagttcaaggagaataccgtaacttggcaacgcatgctgagttagcg
caagaagttggtatgtatccagaaaatatttacatcgtcaaacgtggtgatgtcatggtt
cttggtaaagatggctttaatcacgagggaagtgtcccagctggtgatgtgatgattgac
ggaaatgcgattggtgacgttggtaatattgttcttcgtgaccgcaaagtcttgtcagaa
gatggtattttcattgttgccttgactgttaataaacgcgaaaagaaaatcgtttcaaaa
gctaaaattcacacacgtggttttgtctatgttaagaaaagccgtgatattctgcgtgaa
tcagctgaattggttaatcaaactgttgaaaattacttggcacaagatagctttgactgg
ggtgaattgaaaggagctgtccgcgatgatgtggcaaaattccttttcgaccaaaccaaa
cgtcgccctgctattttaccagtagttatggaagtgagataa

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