Streptococcus gallolyticus UCN34: GALLO_1404
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Entry
GALLO_1404 CDS
T01171
Symbol
uvrB
Name
(GenBank) excinuclease ABC (subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
sga
Streptococcus gallolyticus UCN34
Pathway
sga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GALLO_1404 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sga03400
]
GALLO_1404 (uvrB)
DNA repair and recombination proteins [BR:
sga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GALLO_1404 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GALLO_1404 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
Microtub_bd
AAA_5
AAA_7
UB2H
AAA_16
AAA_19
AAA
AAA_22
UFL1
DUF87
Motif
Other DBs
NCBI-ProteinID:
CBI13896
UniProt:
A0AA36NPP6
LinkDB
All DBs
Position
complement(1474065..1476056)
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AA seq
663 aa
AA seq
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MIDRIENNQFKLVSKYQPSGDQPEAIEALVDNIEGGEKAQILLGATGTGKTYTMSQVIAK
VNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV
NDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYADSVVSLRPGQEISRDQLLND
LVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRIREIESLTGKVL
GEVEHLAIFPATHFMTNEEHMEHAIHNILEEMEEQVKQFEAEGKLIEAQRIRQRTEYDVE
MLREMGYTNGVENYSRYMDGRSEGEPPFTLLDFFPEDFLIMVDESHMTMGQIKGMYNGDR
SRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYELEQTDTVVEQIIRPT
GLLDPEVEVRPTMGQMDDLLGEINSRAEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLI
QTIGRAARNSEGHVIMYADKITESMQKAMDETARRREIQMRYNEEHGIIPQTIKKDIRDL
IAISKSSDTDVAEDTPDYNAMTKAERQETIKKLQKQMQEAAEMLDFELAAQLRDMVLELK
AMD
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatagatagaatagaaaacaaccaatttaaattagtatcaaaataccaaccgtctgga
gaccaaccagaagctattgaggctttggtcgataatattgaaggtggggaaaaagctcaa
attcttcttggagcaacaggaactggtaagacttatacgatgagtcaagttattgctaag
gtcaacaaaccaacgttggtcattgctcataataaaactttggctgggcaactttatggg
gaattcaaagaatttttcccagacaatgctgttgaatattttgtgtcttattatgattac
tatcaaccagaagcttatgtgccttctagcgatacttatattgaaaaagatagctcggta
aatgatgaaatcgataaattacgccattcagcaacatcagccctactagaacgtaatgac
gttatcgtagtagcgtcggtatcgtgtatctatggcttggggtcaccaaaagaatatgct
gatagtgtggttagtttgcgacctgggcaagaaatatcacgtgaccaattgttaaatgat
ttggttgacattcaatttgaacgaaatgatattgattttcaacgtggtcgttttcgtgtg
cgtggcgacgttgtcgaaattttcccagccagtcgtgatgagcacgcttttcgtgtggaa
ttttttggtgacgaaattgaccgtattcgagaaatcgaaagtttgacaggtaaagttctt
ggtgaggtggaacatttagcgattttccctgctacacacttcatgaccaacgaggaacat
atggagcacgccattcacaacattttggaagaaatggaagagcaggtcaagcagtttgag
gcagaaggaaagttgatagaagcgcagcgtattcgccaaagaacggaatacgatgttgaa
atgcttcgtgaaatgggctatacgaatggtgtcgaaaattattcgcgttatatggacggt
cgttcagaaggggaaccgccgtttaccttacttgatttctttccagaagatttccttatt
atggttgatgaaagtcacatgaccatgggccaaatcaaaggaatgtataacggagaccgt
tcgcgtaaggaaatgctggttaattatggttttcgtttgccaagtgcgcttgataatcgt
cctttgcgccgtgaagaatttgaaagtcatgttcaccaaattgtttacgtgtcagccacc
ccaggggattacgagctggaacaaactgatactgttgttgaacaaatcattcgtccaact
ggtttgcttgaccctgaagtggaagtgcgtccaaccatgggacaaatggatgatttgctc
ggtgaaatcaatagccgtgctgaaaagggcgaacgtaccttcattacaacattaactaag
aaaatggcagaagatttgaccgattacctcaaagaaatgggtgtcaaagtcaagtatatg
cattcagatattaaaacgttggaacgtacggagatcattcgtgatttacgtctaggtgtt
tttgatgtcttgattgggattaatttgctccgtgaaggaattgacgtcccagaagtaagc
ttggttgccattcttgatgcggacaaggaaggattcttgcgcaatgaacgtggtcttatt
caaacgattggacgtgcagcgcgaaacagcgaggggcatgttatcatgtatgctgataag
attacagaatccatgcaaaaagccatggacgaaacggcgcgtcgtcgcgaaattcaaatg
cgttacaatgaagaacatggtattattccgcaaacaatcaaaaaagatattcgcgatttg
attgccatttcgaaaagttctgatacagatgtcgcagaagatactccagattacaatgct
atgacgaaagcagaacgtcaagagacaattaagaaacttcaaaaacaaatgcaagaagca
gcagaaatgctcgatttcgaacttgctgcccaattgcgtgatatggtattagaattgaaa
gccatggattag
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