KEGG   Streptococcus gallolyticus UCN34: GALLO_1904
Entry
GALLO_1904        CDS       T01171                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC
  KO
K03701  excinuclease ABC subunit A
Organism
sga  Streptococcus gallolyticus UCN34
Pathway
sga03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GALLO_1904 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sga03400]
    GALLO_1904 (uvrA)
DNA repair and recombination proteins [BR:sga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GALLO_1904 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GALLO_1904 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase nSTAND1 AAA_22 AAA_33 nSTAND3 AAA_23 AAA_18 NACHT AAA_14 Viral_helicase1 DnaJ_CXXCXGXG ATPase RACo_linker AAA_21 cobW DUF87 NB-ARC MMR_HSR1 NTPase_1 Septin PRK MeaB T2SSE DUF463 IIGP FtsK_SpoIIIE PapD_C
Other DBs
NCBI-ProteinID: CBI14395
UniProt: A0AA36NNL0
LinkDB
Position
complement(1977395..1980220)
AA seq 941 aa
MQDKLIIRGARAHNLKNVNVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARMFLGNMEKPDVDSIEGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPY
CINGHGAITASSVEQIVDQVLELPERTRMQILAPVVRRKKGQHKTIFDRIQKDGYVRVRV
DGEIFDISEVPELSKSKMHNIEIVVDRLINKDGIRSRLFDSVEAALRLADGYVIIDTMDG
NELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGSKLEVDLDLVIPDRSKTL
REGALAPWNPISSNYYPAMLEQAMTSFGIDMDTPFENLTEEEQNLVLYGSGEREFHFHYI
NDFGGERNIDLPFEGVVNNIDRRYHETNSDFTRNVMRGYMNELPCATCHGYRLNNQALCV
RVGGENGLNIGQVSDLSVADHLELLTHLELSENEKTIATPIVKEIKDRLTFLNNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLISSLKKMRDLG
NTLIVVEHDEDTMRQADWLIDVGPGAGDFGGQIVASGTPEDVAKNKKSITGQYLSGAKEI
PVPLERRKGNGRVLRVKGASENNLQNIDVTFPLGKFIAVTGVSGSGKSTLVNSILKKAVA
QKLNRNSAKPGKHKVLEGIENIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHY
KDKNIAEILDMTVNDAVEFFAPIPKIARKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLQRFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGVGGGQIVATGTPEEVAKVKESFTGQYLKDKLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgcaagataaattaattattcgtggggcacgtgcccacaatttaaagaatgtcaatgtt
gaaattccgcgggataagttggttgttgtgactggtttgtctggttcaggaaagtcaagt
ttggcatttgatacgatttacgcagaagggcaacgtcgttatgtagaaagtttgtcagct
tatgcgcgtatgtttcttggtaatatggaaaaaccagatgttgattcgattgagggtctc
agccctgctatttctattgaccaaaaaacaactagtaaaaatcctcgttctacggtaggg
acaacgacagaaatcaacgattatctgcgtcttttgtatgctcgcgtggggacaccgtat
tgtatcaatgggcatggtgccattacggcatcatctgttgagcaaattgttgaccaagtt
ttggaattgccagaacggacgcgaatgcagattttagcgccagttgtgcgtcgtaaaaag
ggacaacacaagacgatttttgaccgtattcaaaaagatggttatgtgcgtgtgcgcgtg
gatggcgagattttcgacatttcagaagttcctgagttatctaagagcaaaatgcacaat
atcgaaatcgttgttgaccgtttgattaataaagacggtatccgttcgcgcttgtttgat
tcggtggaagctgcgcttcgattggctgatggttatgtgattattgatactatggatggt
aatgaattgctcttttcagagcattattcatgtcctgtttgtggttttaccgttcccgaa
ttggaaccacgtcttttttcatttaacgcaccgtttggttcatgcccaacctgtgatggc
ttgggaagcaaattggaagtcgatttggatttggtgattcctgaccgtagtaaaacgctt
cgtgaaggggctttagcaccgtggaatccaatctcatctaactattacccagccatgcta
gaacaagccatgacttcttttggtattgatatggatacaccatttgaaaatttgacagaa
gaagaacaaaacttggtcttgtatggctcaggcgagcgtgaattccatttccactatatc
aatgactttggtggtgaacgtaatatcgaccttccgtttgagggagtcgtcaataatatt
gaccgtcgttatcatgaaacaaatagtgactttacacgtaatgttatgcgtggttacatg
aatgaattgccatgtgcaacttgtcatggttatcgtttaaataatcaagcactttgtgtt
cgtgttggtggcgaaaatggcttaaatattgggcaagtgtctgatttgtcagttgctgac
cacttggaacttttaactcacctcgaactctctgaaaatgaaaagacgattgcaacgccg
attgttaaggaaatcaaagaccgtctgaccttcttaaataatgttggcttgaattatttg
accttgtcgcgttctgcggggactttatctggtggtgaaagtcagcgtattcgcttggca
acgcaaattggttcaaacctatcaggtgtcctttatattttggatgaaccttcgattggg
cttcatcaacgtgacaatgaccgtttgatttccagcttgaaaaaaatgcgtgatttgggc
aacaccttgattgtcgttgaacacgatgaagataccatgcgccaagctgattggctcatt
gatgtcggaccaggtgcaggtgattttggtgggcaaattgttgcctctggaacgccagaa
gatgttgccaaaaataaaaaatcaattacagggcagtatttgtctggagcaaaagagatt
cctgtgccactagaacgtcgtaaaggaaatgggcgcgtgcttcgtgtcaaaggtgcttct
gaaaataacctgcaaaatattgatgtgactttcccacttggtaaattcattgcggtgaca
ggtgtttcgggttctggaaaatcaaccttggttaacagtattttgaagaaagctgttgct
caaaaattaaatcgcaattctgccaaacctggtaaacacaaggtacttgaaggtattgag
aacattgaacgcttgattgacattgaccaaagcccaatcggccgtactccgcgttcaaat
cctgcaacttacacaggtgtttttgatgatattcgtgacctttttgctaagaccaatgaa
gctaagattcgtggttacaaaaaaggacgtttctcatttaacgtcaaaggtggacgttgc
gaggcttgctctggtgacggaattatcaagattgaaatgcacttcttgccagatgtttac
gtaccttgcgaggtttgtcatggtacacgttataacagtgaaacgcttgaagttcattac
aaagacaaaaatatcgctgaaattcttgatatgacagtcaatgatgcggttgaattcttt
gcaccaatccctaaaatcgcacgcaaattgcaaactatcaaagacgttggacttggttat
gttactcttggacaaccagccacaacgctgtctggtggtgaagcacagcgtatgaaattg
gcgagtgaacttcacaaacgctcaactggtaagagcctttatatccttgatgaaccaacg
acaggacttcacacagatgacattgctcgtctgcttaaagtccttcaacgcttcgtggat
gatggaaacaccgtgcttgtcattgaacacaatcttgatgtaattaagacagctgaccac
attatcgaccttggaccagaaggcggtgtcggtggcggacaaatcgttgccacaggcaca
ccagaagaggtcgccaaagtcaaagaatccttcacaggacaatatttaaaagacaaattg
aaataa

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