Staphylococcus gallinarum: K3U27_01295
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Entry
K3U27_01295 CDS
T10418
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgai Staphylococcus gallinarum
Pathway
sgai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3U27_01295 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgai03019
]
K3U27_01295 (recQ)
03400 DNA repair and recombination proteins [BR:
sgai03400
]
K3U27_01295 (recQ)
Enzymes [BR:
sgai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3U27_01295 (recQ)
Messenger RNA biogenesis [BR:
sgai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3U27_01295 (recQ)
DNA repair and recombination proteins [BR:
sgai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K3U27_01295 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UEH00991
LinkDB
All DBs
Position
267352..269130
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AA seq
592 aa
AA seq
DB search
MESTLSHYFGYDTFRPGQKEIISKVMDQRNVLGVLPTGGGKSICYQVPGLMLGGTTIVIS
PLISLMKDQVDQLKAAGIRAAYLNSSLTQKEQKAIEAQLKNGDIQFLYVAPERFNNDYFM
ALLQRLPIHLVAFDEAHCISKWGHDFRPSYQEVIHKVFALPQDFTIVALTATATTEVQKD
IMERLNINKHDEVKTSTKRRNLVFQVNPTYQRQKFVLEYVKSHANEAGIVYCSTRKQVEE
LQEALEDHEISSTIYHAGLSNKDREAAQNDFVYDRVRVVIATNAFGMGIDKSNVRFVIHY
NMPGDLESYYQEAGRAGRDGLKSDCILLFSERDIGLHQYFISASKADDDYKDKMGEKLTK
MILYTKTKKCLEATLVHYFEPNEKLEECEQCSNCTRENKTYDMTNEAKMIVSCIARMKQK
ESYSVIIQVLRGEDTDYIRYCEYNKLSTHGIMKQYTTSDLSHLIDELRFKGYLNEHDEIL
TCDNSVKQLLTDEVTIFTTPFKRKSKEIVNINTVEGVDRALFDELIAVRKKLSEDLDIAP
VSIFSDYTLEEFAKRKPESKQDMISIDGVGSYKLKHYCPMFLETIQSYKAQI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaactttatcgcattattttggttatgacacgtttcgtcctggccaaaaggaa
ataatttcaaaagtaatggatcaacgtaatgtattaggggtgttaccaactggtggtggt
aaatcgatttgttatcaagtgccaggtttaatgctaggtggtacgacaattgtcattagt
ccattaatttcattaatgaaggaccaagtcgatcaattgaaggctgctggtattcgcgca
gcatatttaaacagtagtttaacgcagaaagaacaaaaggcgattgaagcgcaattgaaa
aatggtgacatacagtttctttatgttgctccagaacgttttaataatgattattttatg
gcgttattacaacgtctacctatccatttagtagcatttgatgaagcacactgtatttct
aaatgggggcatgattttagaccaagttatcaagaagtgattcataaggtatttgcttta
ccacaagactttacaattgtagctttgactgcaactgccacgactgaagtgcaaaaagat
atcatggaaagactaaatattaataaacacgatgaagttaaaacaagtacgaaacgtcgt
aatttagtctttcaagtcaacccaacttatcaacgccaaaaatttgtacttgaatatgtg
aaatcacatgcaaatgaagctggcattgtttattgttctacgcgtaaacaggttgaagag
ttgcaagaagcattagaagatcatgaaatcagcagtacgatttatcatgcagggttatct
aacaaagacagagaagctgcgcaaaatgatttcgtctatgatcgtgtgcgtgtagtaatt
gcaacgaatgcatttggtatggggattgataagtcgaatgtgcgttttgtgatacattat
aatatgccaggtgatttagagtcatattatcaagaggcaggtcgtgctggccgtgatggt
ctgaaaagtgattgtatcttactctttagtgaacgcgatatcggtttgcatcagtacttt
atttctgcttcaaaagcagatgatgattacaaagataaaatgggtgaaaaactaacaaag
atgattctttatacaaaaacgaagaagtgtttggaagcaacgttagtccattactttgaa
ccaaatgaaaagctagaagagtgtgagcaatgtagtaattgtacgcgagagaacaagacg
tatgacatgactaatgaagcaaaaatgattgtaagttgtatcgcgagaatgaaacaaaaa
gaaagctatagtgttattattcaagttctacgaggtgaagatactgattatatccgttat
tgtgaatataataaattatctacacacggcataatgaagcaatatacaacctcagatctt
agtcatttaatcgatgaacttagatttaagggatatttaaacgaacacgatgaaattttg
acgtgtgataattcagtcaaacaattgttgacggatgaagtgacaatctttacaactcca
tttaaacgtaaatcgaaagaaattgtgaatatcaataccgtcgaaggtgttgatcgtgca
ttatttgatgaattgattgcagtccgtaagaaattgagtgaagatttggatattgcgccg
gtaagtattttctcagattataccttagaagaatttgcaaaaagaaagccagaatctaaa
caagatatgatctctattgatggtgtaggaagttataaattaaagcattactgtccaatg
ttcttagagactattcaatcttataaagcacaaatttaa
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