Staphylococcus gallinarum: K3U27_05280
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Entry
K3U27_05280 CDS
T10418
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sgai Staphylococcus gallinarum
Pathway
sgai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgai00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K3U27_05280 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgai03021
]
K3U27_05280 (rpoD)
Transcription machinery [BR:
sgai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K3U27_05280 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
UEH01757
LinkDB
All DBs
Position
complement(1099651..1100757)
Genome browser
AA seq
368 aa
AA seq
DB search
MSGNRVKIKKQTIDPSLTIEDVKKQLIEKGKKEGHLSHEEIAEKMQNFEMDSDQMDEFFD
QLTDNDISLVNEKDSSDTDEKLNPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIEL
AKKIEQGDEIAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIG
EEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaatagagttaaaataaaaaaacaaaccattgatccatctttaacaatagaa
gatgtaaaaaaacaattaattgaaaaaggtaaaaaagaaggacatttaagtcatgaagaa
attgctgaaaaaatgcaaaacttcgaaatggattcagaccaaatggatgaattctttgat
caattaactgacaatgatattagtttagttaatgaaaaagacagttctgatactgatgaa
aagttaaatccaaatgatttaagtgcccctccaggagttaaaataaatgacccagtccgt
atgtatttaaaagaaattggacgtgtgaatcttttaagtgcacaagaagagattgaattg
gctaaaaaaatcgaacaaggcgatgaaattgcaaaatctcgtttagcagaagctaactta
cgtcttgtagtaagtattgctaaaagatatgtaggccgtggtatgttattccttgatttg
attcaagaaggaaacatgggcttaattaaagcagtagaaaagttcgacttcagcaaaggg
tttaaattctcgacatatgcaacttggtggattcgtcaagcgattacacgtgctatcgcc
gaccaagcaagaacgattcgtattcctgtgcacatggttgagacaatcaacaaattaatt
cgcgtacaaagacaattattacaagatttaggccgtgatccagctcctgaagaaattggt
gaagaaatggatttaccacctgaaaaagtaagagaaatccttaaaattgctcaagaacca
gtatctttagaaacgccaataggtgaagaagatgacagtcatttaggtgacttcattgaa
gaccaagaggcgcaaagtccttctgatcatgctgcttatgaattattaaaagaacaatta
gaagatgtgttagatacattgactgaccgagaagaaaatgtattacgactacgttttggt
ttagatgatggtagaacgcgtacattagaagaagtaggtaaagtcttcggtgttactcga
gaacgtattcgtcaaatcgaggctaaagcgcttagaaaattaagacatccaagtagaagt
aaacgtttgaaagactttatggactaa
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