Staphylococcus gallinarum: K3U27_12900
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Entry
K3U27_12900 CDS
T10418
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sgai Staphylococcus gallinarum
Pathway
sgai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3U27_12900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgai03019
]
K3U27_12900
03009 Ribosome biogenesis [BR:
sgai03009
]
K3U27_12900
Enzymes [BR:
sgai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K3U27_12900
Messenger RNA biogenesis [BR:
sgai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3U27_12900
Ribosome biogenesis [BR:
sgai03009
]
Prokaryotic type
rRNA helicases
K3U27_12900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UEH00598
LinkDB
All DBs
Position
complement(2709474..2710973)
Genome browser
AA seq
499 aa
AA seq
DB search
MQNFKELGISDKVVETLESIGFTEATPIQKDSIPLALEGKDVLGQAQTGTGKTGAFGIPL
IEKVMGKEGVQALILAPTRELAMQVAESIKEFSKGLNVQVVTVFGGMPIDRQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMKFIMDKIPASQRQTML
FSATMPKAIQTLVQQFMKSPSIVKTMNNENSNPQIEEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQLDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAITFVNPIEMDYIRQIEQTNK
RQMQALRPPHRKEVLKARESDIKGKVQKWMSRDSEPRLQRIASELIEEYSDVNLVAALLQ
ELVESNDDVDVQLTFEKPLSRKNRQSKGPKRGNNKRGNKFDNKNRRSKGGYNKKKNDRSN
DRNNNKKSMKGRTFADHKK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaattagggatctcggataaggtagttgaaaccctagaatctatt
gggtttactgaggccacacctatacaaaaagatagtatccctcttgccttagaaggtaaa
gacgttcttggccaagcacaaacaggtacagggaaaactggtgcgtttggtattccatta
atcgaaaaagtaatgggtaaagaaggcgtccaagctttaatcttagctcctacaagagag
ttagcgatgcaagtagccgaatcaattaaagaatttagtaaaggacttaacgttcaagtc
gttactgtatttggtggtatgccgatcgaccgtcaaatcaaagcacttaaaaaaggccct
caaatcgtggttggtacaccaggacgagtgattgaccatttaaatcgtcgtacattaaaa
acaaacgatattcacacattaatcttagatgaagcagatgaaatgatgaacatgggcttt
atcgatgatatgaaatttatcatggataagattcctgcttcacaacgtcaaacaatgcta
ttctcagcaacgatgcctaaagcaattcaaacgttagttcaacaatttatgaaatcacca
tcaattgttaaaacgatgaataatgaaaattcaaatcctcaaattgaagagttctatact
attgtaaaagaattagaaaaatttgatacatttacgaatttcttagatgtccatcaacca
gagcttgctattgtattcggccgtacgaaacgccgtgtagatgaattgacaagtgcattg
atttctaaaggttataaagctgaaggattacatggtgatattacacaagctaaacgttta
gaagtacttaaaaaattcaaaaacgatcaattagacattttagttgcaacagatgtagct
gcaagaggattagatatttctggtgtaagtcatgtatataactttgatattcctcaagat
acagaaagttatacacatagaataggacgtactggtcgtgcaggtaaagaaggtattgcg
attacatttgttaatccaattgagatggattatatccgtcaaattgaacaaacaaataaa
cgtcaaatgcaagcgttaagaccaccacatcgtaaagaagtattaaaagcgcgtgaaagt
gatattaaaggtaaagtccaaaaatggatgtcacgtgatagtgaaccacgattacaacgt
attgcttcagaattaattgaagaatatagtgacgttaacttagtagctgcgttattacaa
gaattagtggaatcaaatgatgatgtagatgtacaattaacatttgaaaaaccactttct
cgtaaaaacagacaaagtaaaggtccaaaacgtggtaacaataaacgcggtaataaattc
gataacaaaaatcgtcgttcaaaaggcggttataataagaagaaaaacgatcgctcaaac
gaccgaaataataataaaaagtcaatgaaaggtcgaactttcgctgaccacaagaaataa
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