Staphylococcus gallinarum: K3U27_13095
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Entry
K3U27_13095 CDS
T10418
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sgai Staphylococcus gallinarum
Pathway
sgai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3U27_13095 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgai03021
]
K3U27_13095 (rho)
03019 Messenger RNA biogenesis [BR:
sgai03019
]
K3U27_13095 (rho)
Transcription machinery [BR:
sgai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K3U27_13095 (rho)
Messenger RNA biogenesis [BR:
sgai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K3U27_13095 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
S1CSD-TOTE-2
ATPase_2
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
UEH00637
LinkDB
All DBs
Position
complement(2743012..2744328)
Genome browser
AA seq
438 aa
AA seq
DB search
MPEKERTSPQYESFHELYKNYTTKDLTQKAKSLKLINYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQQDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDENAEEVKKRPHFQALTPLYPEERIMLETTQQNYSTRIMDLITPIGLGQ
RGLIVAPPKAGKTSLLKEIANAIATNKPEAELFVLLVGERPEEVTDIERSVETAEVVHST
FDEPPQHHVKVAELLLERAKRLVEIGKDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSMTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLAE
RRVFPAIDIGRSSTRKEELLISPKELESLWQLRNMFTDSLDFTERFVRKLKRTTDNKEFF
EQLQKAAEESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaagaacgtacatcacctcagtatgaatcgttccacgaattatacaaaaat
tacactactaaagatctcactcaaaaagcaaaatctcttaaattgataaattatagtaaa
ttaaataaaaaagaattggtgcttgcaattatggaagcacaaatggaaaaagatggaaac
tattatatggaaggtatcttagatgatatccaacaagatggttatggtttccttcgaact
gtaaattattcaaaaggtgaaaaagatatctatatttcagctagtcaaatacgtcgtttc
gaaattaaacgtggcgataaagtgactggtaaagttagaaagcctaaggataatgaaaaa
tactatggtttattacaagttgactttgttaatgatgagaatgcagaggaagtaaagaaa
cgaccgcatttccaagcgttgacacctttatatccagaagaacgcataatgttagaaaca
acacagcaaaattattctacacgaattatggatttgatcacgccgattggacttggtcaa
cgtggacttatcgttgcaccaccaaaagcaggtaagacctcattactaaaggaaattgcc
aatgcgattgctacgaataaaccagaagcagaattatttgtcctacttgttggagaaaga
ccggaagaggttacagatattgaaagatctgttgaaactgcagaagtagttcattctaca
tttgatgaaccgcctcaacaccatgtaaaagtagcagaattattattagaacgtgcaaag
agactcgtggaaattggtaaggacgttattatcttaatggattcaattacacgactggca
cgtgcatacaacttagtaatcccacctagtggtcgaacattatcaggtggtctagaccca
gcatcattacacaaacctaaagcattctttggtgcggcaagaaatattgaagctggtgga
agtatgactattttagcgactgctttagttgatactggatcacgtatggatgacatgatt
tatgaggagtttaaaggtacgggtaatatggaattacatcttgatcgtaaacttgcagaa
cgtcgtgtattccctgctattgatattggtagaagttcaacacgtaaagaagaattacta
atttcaccaaaagaattagaatctttatggcaattgcgtaatatgtttacagattcactc
gattttacagaacgttttgtacgtaaattaaaacgtacaactgataataaagaattcttt
gaacagttacaaaaagctgcagaagaaagcacaaagacaggaaagccaattatttaa
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