Streptomyces galilaeus: CP966_12055
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Entry
CP966_12055 CDS
T06932
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
sgal
Streptomyces galilaeus
Pathway
sgal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP966_12055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgal03019
]
CP966_12055
03009 Ribosome biogenesis [BR:
sgal03009
]
CP966_12055
Enzymes [BR:
sgal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CP966_12055
Messenger RNA biogenesis [BR:
sgal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP966_12055
Ribosome biogenesis [BR:
sgal03009
]
Prokaryotic type
rRNA processing factors
CP966_12055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QEU65933
UniProt:
A0A5J6EPW0
LinkDB
All DBs
Position
complement(2653145..2657206)
Genome browser
AA seq
1353 aa
AA seq
DB search
MLEPTESTESVPDSATNSPSDTLPPRRRRRAASRPAGPPVGAAETSVETVAPAIPAAESV
ADLAAEDTENVEVTETTEDTAEETTEATAVGAPAEEAAPAARPRRRATRRASAPTGAPAG
APAAVEAAETVVPATAAEPAVAAAEEQAPAEEAAPRRTRRRATRTVTAPAAAEQTDTTQV
VAETTEPAAAEAAVTAEPAEAAPAGRTRRRATRRATAPTGAPQAAEVTETVAEVAEVPAV
VEQAEPAEAPAAEEAPRRTRRRAARAAAAPAEAPEQAEVPAEPAVVQEEAPEAPAPQAEE
EAAGPRRGRRRVTRAAVGFSAPPRPAGEEEDTPRRPTRPAVAVFQAPVFTEPRFQTPERA
AAEAAAAEVEEPVEEEPTAPVEVAEELPEEQTGPRRRRRRRGAGPAEEPAEPTRTVEPAA
EDEEEPEEAEEAADESAEGDDDTDEGASRRRRRRGGRRRRRGDSADGDSGDVDTDELAAE
QAAQDAEDTAEQEDEDAEEGHADDEGGSTAGSRRRRRRRRRAGDGASDAEPVDSDPERTV
VKVREPRKATEPSDEVQSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVER
VMVVRQYGDRTQIGVLEDGVLVEHYVNKEQSTSYVGNVYLGKVQNVLPSMEAAFIDIGKG
RNAVLYAGEVNFEALGMANGPRRIESALKSGQPVLAQVTKDPIGHKGARLTSQVSLPGRY
LVYVPEGSMTGISRKLPDTERARLKSILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQ
SQWEDIQKKAKSGNAPTLLYGEPDMTVRVVRDIFNEDFTKVVVSGDEAWSTIHGYVSHVA
PDLADRLSRWTSEVDVFATYRIDEQLAKALDRKVWLPSGGSLVIDRTEAMVVVDVNTGKF
TGQGGNLEETVTRNNLEAAEEIVRQLRLRDLGGIIVIDFIDMVLEQNRDLVLRRLLECLG
RDRTKHQVAEVTSLGLVQMTRKRVGQGLLESFSETCVHCNGRGVIVHLDQPTAIGGGGKR
KKRGRGGDVLEHDHEHETVAAETVVSAGEEAETAAEVAAEVAEPVALEVPEFEPDEELYS
SVAEAEAAAGRGRGRRRSSRRASAPAGAPRSGAPRREAVSEQVAEVPTAQDVSAEAEAER
PVQPAEAAVAHAAPVAVEDPVVEAPVAEEAAPRGRTRRRATRKVSAPAGSPAGAEAAVVT
VAESAPAQAPAEQPEAQAEPVVEQAAEPVADSAAPARPRRRAVRKATAPTAPEETAVVVV
PSAAAEAPAQAAPAEAEAEAAEEPEEGAPVKKTAARKTAKKATAKKAATKKTAAKKTAAK
KTVAKKTTAKKAASKTTAAAQQSAPSVSANTQD
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaccaaccgaatccacagagtccgtaccggactccgcaacgaacagcccgagc
gataccctgccgccgcgtcgtcggcgccgtgccgcttcccgaccggcgggtccgccggtc
ggtgccgccgagacctcggtggagaccgtcgcgccggccataccggccgccgagtccgtc
gccgacctggccgcggaggacaccgagaacgtcgaggtcaccgagaccaccgaggacacc
gcggaagagacgacggaggccaccgccgtcggggcacccgccgaagaggccgcccccgcc
gcgcgtccgcgccgccgggccacccgtcgggcgtccgcgcccaccggtgctccggccggt
gctcccgccgcggtcgaggccgccgagaccgtggtgccggcgaccgccgcagagccggcc
gtcgccgccgccgaggagcaggcccccgccgaggaggccgctccgcgccgcacccgccgc
cgggccacccgcaccgtgacggcacccgccgccgcggagcagaccgacaccacgcaggtt
gtcgcggagaccaccgagcccgcggctgccgaggccgccgtgacggcggaaccggccgag
gccgcgcccgcggggcggacccgccgcagggccacgcgccgtgcgaccgcgcccaccgga
gcgccgcaggctgccgaggtcaccgagaccgtcgccgaggtcgccgaggtgcccgccgtc
gtcgagcaggccgagcccgccgaggcgcccgccgccgaggaggccccgcgtcgcacgcgc
cgtcgggccgcccgcgccgctgccgcgcccgccgaggcgccggagcaggccgaggttccc
gccgaacccgccgtcgtgcaggaggaggcgcccgaggcgcccgccccgcaggccgaggag
gaggcagccggcccccgccgtgggcgtcggcgcgtcaccagggccgccgtcggattctcc
gcgcccccgcgtccggccggcgaggaggaggacaccccgcgtcgtcccacccgccccgcg
gtcgccgtcttccaggcgcccgtgttcaccgagccccgcttccagacgccggagcgcgcc
gcagccgaggccgcggcagccgaggtcgaggagcccgtcgaggaggagcccacggctccg
gtcgaggtcgccgaggagcttccggaggagcagaccggtccgcgccgccgccgcaggcgc
cgcggtgccggcccggccgaggagcccgcggagccgaccaggacggtcgagcccgccgcc
gaggacgaggaagagccggaggaggccgaggaggccgccgacgagagcgccgagggtgac
gacgacaccgacgagggcgcgtcgcgccgccgtcgccgccggggcggccgtcgccgtcgt
cgcggtgacagcgcggacggcgactccggtgacgtcgacaccgacgagctggccgccgag
caggccgcccaggacgccgaggacaccgccgagcaggaggacgaggacgccgaggagggc
cacgccgacgacgagggaggctccaccgcgggcagccgtcgccgccgtcgccgtcgtcgc
cgcgccggggacggcgccagcgacgccgagccggtcgacagcgacccggagcgcaccgtc
gtcaaggtccgcgagccgcgcaaggccaccgagccgtccgacgaggtccagtccatcaag
ggctcgacccgtctggaggcgaagaagcagcgccgccgtgaaggccgtgagcagggccgc
cgtcgcgtcccgatcatcaccgaggccgagttcctggcccgccgcgaggccgtcgagcgc
gtgatggtcgtccgtcagtacggcgaccgtacgcagatcggcgtccttgaggacggcgtg
ctcgtcgagcactacgtcaacaaggagcagtcgacctcgtacgtcggcaacgtctacctg
ggcaaggtccagaacgtgctgccgtcgatggaggccgccttcatcgacatcggcaagggc
cgcaacgcggtgctgtacgccggtgaggtcaacttcgaggcgctcggcatggccaacggg
ccgcgccgcatcgagtccgccctgaagtcgggccagccggtcctcgcgcaggtcaccaag
gacccgatcgggcacaagggcgcccgtctgaccagccaggtctccctgccgggccgctac
ctcgtgtacgtccccgagggctcgatgaccggcatcagccgcaagctgcccgacaccgag
cgggcccggctgaagagcatcctcaagaagatcgtccccgaggacgcgggcgtcatcgtg
cgcaccgccgccgagggcgcgagcgaggacgagctgcgccgcgacgtcgagcggctccag
tcgcagtgggaggacatccagaagaaggccaagagcggcaacgcgccgacgctgctctac
ggcgagccggacatgaccgtccgggtcgtccgcgacatcttcaacgaggacttcaccaag
gtcgtcgtcagcggtgacgaggcctggtcgaccatccacggctacgtctcgcacgtagcc
ccggacctggccgaccggctgtcccgctggacctccgaggtcgacgtcttcgccacctac
cggatcgacgagcagctcgccaaggccctggaccgcaaggtctggctgcccagcggcggt
tcgctggtgatcgaccggaccgaggcgatggtcgtcgtcgacgtcaacaccggcaagttc
accggtcagggcggcaacctcgaggagacggtcaccaggaacaacctggaggcggccgag
gagatcgtgcgtcagctcaggctgcgcgacctcggcggcatcatcgtgatcgacttcatc
gacatggtgctggagcagaaccgggacctcgtgctgcggcgcctgctggagtgcctgggc
cgggaccgtacgaagcaccaggtcgccgaggtgacctcgctgggcctcgtgcagatgacc
cgcaagcgggtcggccagggcctgctggagtcgttctccgagacctgcgtccactgcaac
ggccgcggtgtcatcgtccatctcgaccagccgaccgccatcggtggcggcggcaagcgc
aagaagcgcggccggggcggcgacgtcctggagcacgaccacgagcacgagacggtcgcc
gccgagaccgtggtgagcgcgggcgaggaagccgagaccgcggccgaggtcgccgccgag
gtggccgagccggtcgccctggaggtgcccgagttcgagcccgacgaggagctgtacagc
agcgtcgccgaggcggaggccgcggcgggccgcggtcgtggccggcgccggtcgagccgc
cgggcctcggcccccgcgggtgcgccgaggagcggtgcgccgcggcgggaggccgtgtcc
gagcaggtggcggaggttcccacggcgcaggacgtgtccgccgaggcggaggccgagcgt
ccggtgcagccggccgaggccgccgtcgcgcacgccgcgccggtcgccgtcgaggacccg
gtcgtcgaggcgcccgtcgccgaggaggccgcacccaggggccgtacgcgccgtcgggcc
acccgcaaggtgtccgcgccggccggttcgcccgccggggcggaggccgccgtcgtgacg
gtcgccgagtccgcgcccgcgcaggctccggcggagcagcccgaggcgcaggccgagccg
gtcgtcgagcaggctgccgagccggtcgccgacagcgcggccccggcccgcccgcggcgc
cgtgccgtgcgcaaggccaccgcgcccaccgcgcccgaggagacggccgtcgtggtcgtc
ccgtcggccgcggcggaagccccggcccaggccgccccggccgaagccgaggcggaggcc
gccgaggagccggaggagggcgccccggtcaagaagacggccgcccgcaagacggcgaag
aaggccacggcgaagaaggccgccaccaagaagaccgcggcgaagaagacggccgcgaag
aagacggtggccaagaagacgacggccaagaaggcggcgtcgaagacgacggcggcggcg
cagcagagcgccccgtccgtctcggccaacacgcaggactga
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