Streptomyces galilaeus: CP966_17370
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Entry
CP966_17370 CDS
T06932
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
sgal
Streptomyces galilaeus
Brite
KEGG Orthology (KO) [BR:
sgal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgal03019
]
CP966_17370 (hrpA)
Enzymes [BR:
sgal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CP966_17370 (hrpA)
Messenger RNA biogenesis [BR:
sgal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CP966_17370 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
HA2_N
AAA_22
nSTAND3
AAA_25
T2SSE
SLFN-g3_helicase
AAA_16
NACHT
AAA_30
ResIII
PhoH
NTPase_1
MetJ
TsaE
Motif
Other DBs
NCBI-ProteinID:
QEU66831
UniProt:
A0A5J6ESX9
LinkDB
All DBs
Position
3819424..3823368
Genome browser
AA seq
1314 aa
AA seq
DB search
MSTHPAPALGVLAPRLAELSLRDAHRLGRRLEGARKIRNPQARAAVLAEIEAEVATAEER
MGARRTRMPAVTYPEQLPVSQKKDVIAEAIRDHQVVIVAGETGSGKTTQIPKICLELGRG
VRGMIGHTQPRRIAARTVAERVAEELRSPLGEAVGWKVRFTDQVNPDATFVKLMTDGILL
AEIQTDRELRAYDTIIIDEAHERSLNIDFLLGYLAQLLPRRPDLKVIITSATIDPERFSR
HFGEAPIIEVSGRTYPVEVRYRPLLEEESEDADRDQITAITDAVDELMGEGKGDILVFLS
GEREIRDTADALEKKQYRFTEVLPLYARLSHAEQHRVFQQHTGRRIVLATNVAETSLTVP
GIKYVIDPGFARISRYSHRTKVQRLPIEAISQASANQRKGRCGRTSDGICIRLYSEDDFL
ARPEFTDAEILRTNLASVILQMTAAGLGEIEKFPFIDPPDHRNIRDGVQLLQELGALDPA
QKDPRRRLTETGRKLAQLPVDPRLARMVLEADKNGCVREVMVIAAALSIQDPRERPADKQ
TQADQQHARFKDETSDFLAYLNLWRYIREQQKERGSSSFRRMCKQEYLNFLRIREWQDIY
SQLRTVAKQLGIHLDERDAAGDSIHVSLLAGLLSHIGMKDVKEGNKNEYLGARSAKFALF
PGSALFKKQPRFVMSAELVETSRLWARVNAKIEPEWVEPLAEHLLKRTYSEPHWEKDQAA
VMALEKVTLYGVPIIAQRKVNYGRIDPEASRELFIRNALVEGDWRTHHKFFADNRKLLSE
VEELEHRARRRDIVVDDETLYDFYDQRVPDHVVSGAHFDSWWKHKRHEQPDFLDFEREML
IRESAGAVTKDDYPDTWRQGPLKFRVTYQFEPGADADGVTVHIPLQVLNQVTDEGFDWQI
PGLREEVVTELIRSLPKPIRRNYVPAPNFAQRFLDQAVPLREPLTTAMARDLKRMVGVPF
EAEDFDWSRLPDHLKITFRIVDERRRNLAEDKDLEALKLRLRPKARQAISQAAAAIAERE
GGESLERSGLTDWTIGTLTRVFETRRAGQPVKAYPALVDDGDTVSVRLFDTEEEQAAAMW
KGTRRLILRNIPVNPAKFASEKLTNAHKLALSANPHGSVQALFDDCAMAAADKLIGDFGG
PAWDEESYRKLYDKVRAEIVDTTVRTVGQVQQVLAAWQSCERRLKGVRSPSLLANLADVR
KQLDALVRPGFVTWAGLRRMPDLMRYLVAADRRLQQMPTNAQRDTARMEKVHEMQDEYAW
LLEQLPAGRPVPSSVLDIRWMIEELRVSYFAHALGTAYPVSDKRIVKAIDAAAP
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcaccctgcccccgccctcggcgttctcgccccccgtctggccgagctgtcc
ctgcgtgatgcgcaccggctcgggcgcaggctcgaaggcgcgcgcaagatccgcaaccct
caggcgcgagccgccgtcctcgccgagatcgaggccgaggtcgcgaccgccgaggaacgg
atgggcgcgcggcgcacccgtatgcccgcggtcacctatcccgaacagctgccggtcagc
cagaagaaggacgtgatcgcggaggccattcgcgatcaccaggtcgtgatcgtggccggt
gagaccgggtccggcaagacgacgcagatcccgaagatctgtctggagctgggccggggc
gtccgcggcatgatcgggcacacccagccgcgccggatcgccgcccggacggtggccgag
cgggtcgccgaggagctgcgctcgccgctcggcgaggccgtcggctggaaggtgcggttc
accgaccaggtgaacccggacgccaccttcgtgaaactgatgacggacggcatcctgctc
gccgagatccagaccgaccgcgagctgcgcgcctacgacacgatcatcatcgacgaggcc
cacgagcggtccctcaacatcgacttcctgctgggctacctcgcccagctgctgccgagg
cgccccgacctgaaggtgatcatcacctcggccacgatcgaccccgagcggttctcccgg
cacttcggtgaggcgccgatcatcgaggtcagcgggcggacgtaccccgtggaggtgcgt
taccggccgctcctggaggaggagtccgaggacgccgaccgcgaccagatcaccgcgatc
acggacgccgtcgacgagctgatgggggaggggaagggcgacatcctcgtcttcctctcc
ggtgagcgggagatccgggacaccgcggacgcgctggagaagaagcagtaccggttcacc
gaggtgctgccgctgtacgcccgcctctcgcacgccgagcagcatcgggtgttccagcag
cacaccggccgcaggatcgttctcgcgaccaacgtcgccgagacctcgctgaccgttccg
ggcatcaagtacgtcatcgatcccgggttcgcccggatcagccggtacagccatcgcacc
aaggtgcagcggctgccgatcgaggcgatctcgcaggccagcgccaaccagcgcaagggc
cgctgcggccgtacctccgacggcatctgcatccggctctacagcgaggacgacttcctc
gcccggcccgagttcacggacgcggagatcctgcggaccaacctggcgagcgtcatcctc
cagatgaccgcggccgggctgggcgagatcgagaagttcccgttcatcgacccgccggac
caccgcaacatccgggacggcgtgcagctcctccaggagctgggcgccctggacccggcg
cagaaggacccgcgcaggcggctcacggagaccggccgcaagctggcccagctgcccgtg
gacccgcggctggcccggatggtcctggaggccgacaagaacggctgtgtccgcgaggtc
atggtgatagccgccgcgctgtccatccaggacccgcgcgagcgcccggccgacaagcag
acccaggccgaccagcagcacgcccgcttcaaggacgagaccagcgacttcctcgcctac
ctcaacctgtggcggtacatccgcgagcagcagaaggagcgcggctcgtcgtcgttccgc
cggatgtgcaagcaggagtacctgaacttcctgcgcatccgcgaatggcaggacatctac
tcgcagctgcggaccgtcgccaaacagctgggcatccacctcgacgagcgggacgccgca
ggcgacagcatccatgtctcgctcctcgccggcctgctgtcccacatcgggatgaaggac
gtcaaggaaggcaacaagaacgagtatctgggcgcccggagcgccaagttcgcgctcttc
cccggctcggcgctgttcaagaagcagccccggttcgtcatgtcggcggaactcgtggag
acgagccgcctctgggcgcgcgtcaacgccaagatcgagcccgaatgggtcgagccgctc
gccgagcacctcctgaagcggacgtacagcgagccgcactgggagaaggaccaggccgcg
gtgatggcgctggagaaggtcacgctgtacggcgtgccgatcatcgcccagcgcaaggtg
aactacgggcggatcgacccggaggcctcccgcgagctgttcatccgcaacgcgctcgtc
gagggcgactggcgcacgcaccacaagttcttcgccgacaaccgcaaactcctcagcgag
gtcgaggagttggagcaccgggcccggcgcagggacatcgtcgtcgacgacgagaccctg
tacgacttctacgaccagcgggtgcccgaccatgtcgtgtcgggcgcccacttcgactcc
tggtggaagcacaagcggcacgagcagcccgacttcctggacttcgagcgggagatgctc
atccgggagtcggccggcgcggtcaccaaggacgactatccggacacctggcggcagggt
ccgctgaagttccgggtgacctaccagttcgagccgggcgcggacgcggacggcgtgacc
gtccacatcccgctccaggtcctcaaccaggtcacggacgagggcttcgactggcagatc
ccgggtctgcgcgaggaggtcgtcaccgagctgatccgttcgctgccgaagccgatccgc
cgcaactacgtgccggcgccgaacttcgcgcagcggttcctggaccaggcggtgcccttg
cgggagccgctgacgacggcgatggcccgcgacctcaagcggatggtcggtgtccccttc
gaggccgaggacttcgactggtcccgcctccccgaccacctgaagatcaccttccggatc
gtcgacgagcggcgtcgcaatctggccgaggacaaggacctggaggcgctgaagctacgg
ctgaggcccaaggcccgccaggccatctcccaggccgccgcggccatcgccgagcgggag
ggcggcgagtcgctggagcgctccgggctgaccgactggacgatcggcacgctcacccgc
gtcttcgagacccgccgggccggccagccggtcaaggcgtacccggcgctggtcgacgac
ggcgacaccgtctccgtccgcctcttcgacacggaggaggagcaggccgcggcgatgtgg
aagggcacccgccggctgatcctgcgcaacatcccggtcaacccggcgaagttcgcgtcc
gagaagctgacgaacgcccacaagctcgccctgtccgcgaatccgcacggctccgtccag
gccctcttcgacgactgcgcgatggccgcggcggacaagctgatcggcgacttcggcgga
ccggcctgggacgaggagtcgtaccggaagctgtacgacaaggtacgggcggagatcgtc
gacacgaccgtgcggacggtcggtcaggtgcagcaggtcctggcggcctggcagtcctgc
gaacgccgcctgaagggcgtacgcagcccctcgctgctggcgaacctggcggacgtacgc
aaacagctggacgcgctcgtacggcccggcttcgtgacgtgggcggggctgcgccggatg
cccgacctgatgcgctacctcgtggccgcggaccggcgcctgcagcagatgccgaccaac
gcccagcgggacaccgcccgcatggagaaggtccacgagatgcaggacgagtacgcctgg
ctgctggagcagctgcccgcgggccgcccggtgccgtcctcggtgctggacatccggtgg
atgatcgaggagctgcgggtgagctacttcgcccacgcgctgggcacggcgtaccccgtc
tccgacaagcggatcgtgaaggcgatcgacgcggccgcaccgtga
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