Streptomyces galilaeus: CP966_20920
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Entry
CP966_20920 CDS
T06932
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sgal
Streptomyces galilaeus
Brite
KEGG Orthology (KO) [BR:
sgal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgal03016
]
CP966_20920
Enzymes [BR:
sgal01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CP966_20920
Transfer RNA biogenesis [BR:
sgal03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CP966_20920
Prokaryotic type
tRNA splicing ligases
CP966_20920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QEU67425
LinkDB
All DBs
Position
4574954..4576147
Genome browser
AA seq
397 aa
AA seq
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MSYVEMPGAKVPIRMWADPATVEDGALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDSPVEPG
RFHGLATGGWDGFWGRFDGVADAVKFRGERAAKQMGTLGSGNHYIELLFDSEGSVWLTLH
SGSRNIGKELAEFHIGVAQKLPHNQGLIDRDLAVFVADTPQMAAYRNDLFWAQEYAKYNR
TIMMALLKDVVRKEFKRAKPTFEQEISCHHNYVAEERYEGMDLLVTRKGAIRAGSGEFGI
IPGSMGTSSYIVKGLGNEKAFNSASHGAGRRMSRSAAKRRFTTKDLEEQTRGVECRKDSG
VVDEIPGAYKNIDHVMEQQRDLVQVVAKLKQFICVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagatgccgggcgcgaaggttccgatccgtatgtgggccgatcccgcg
acggtcgaggacggcgcgctccagcagctgcgcaacgtcgccaccctgccgtggatcaag
ggcctggccgtcatgccggacgtgcactacggcaagggcgcgacggtcggatctgtcatc
gccatgcagggagcggtgtgcccggcggcggtcggcgtcgacatcggctgcggaatgtcc
gcggtcaagacctccctcacggcgaacgacctgccgggggacctgtcccggctccggtcg
aagatcgagcaggcgattccggtggggcgggggatgcatgacagtcccgtcgagccgggg
cggttccatgggctggcgaccggggggtgggacgggttctgggggcggttcgacggggtc
gccgacgcggtgaaattccgtggggagcgggctgctaagcagatgggaacgcttggatca
ggcaaccactacatcgaactgttgtttgattccgagggttctgtgtggctcacgctgcac
tccggttcccggaacatcggcaaggaactcgccgagttccatatcggtgtggcgcagaag
ctcccgcacaaccagggtctgatcgaccgcgatctcgccgtgttcgtcgcggacactccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgcgaagtacaaccgc
acgatcatgatggcgctcctgaaggacgtggtccgtaaggagttcaagagggcgaagccg
accttcgagcaggagatctcgtgccatcacaactacgtggcggaggaacgctacgagggc
atggacctgctggtcacacggaagggtgcgatccgggcgggctccggtgagttcgggatc
atccccggttccatgggcacgagttcgtacatcgtgaagggcctcggaaacgagaaggcc
ttcaactcggcctcccacggggccggtcggcggatgagccggagcgcggccaagcgtcgc
ttcacgacgaaggacctggaggagcagacgcggggcgtggagtgccgcaaggactccggc
gtcgtcgacgagatcccgggtgcctacaagaacatcgaccatgtgatggagcagcagcgg
gacctggtgcaggtcgtggcgaagctgaagcagttcatctgcgtgaagggttga
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