Streptomyces galilaeus: CP966_21810
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Entry
CP966_21810 CDS
T06932
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sgal
Streptomyces galilaeus
Pathway
sgal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP966_21810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgal03021
]
CP966_21810
03400 DNA repair and recombination proteins [BR:
sgal03400
]
CP966_21810
Enzymes [BR:
sgal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP966_21810
Transcription machinery [BR:
sgal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP966_21810
DNA repair and recombination proteins [BR:
sgal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP966_21810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
QEU67575
LinkDB
All DBs
Position
4757456..4761355
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDDERRTRDLPSLEAHVSVERQQVENRRDSDLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWTRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGALRDVKGE
ERSFSSVAEAIMAFDAGELSLQSRVDIRFPVGTIPPRGWTPPAQEEGEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYEVGKKQLSEIVNDLAERYPKVIVAATLDNLKASGFFWAT
RSGVTVAISDIVVPDAKRAIVKGYEALDEKVQKQYERGLITKEERTQELIAIWTKATNEV
AEAMNANFPKTNPVSMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLAIAERG
EDGVLHKADNAETSVYARCLAEDIVVDGKVLAPAGVDLGDVLIDQLVKAGVEEVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKIVITPDDGSDETAFPISKRSRL
KVEEGEHVEVGQQLTVGTQNPHDVLRILGQRAVQVHLVAEVQRVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagccagagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcggatgggccacatcgagcttgccgctccc
gtcacgcacatctggtacttcaagggtgttccgtcacgccttggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacgtacgtcgac
gacgagcgccgtacgcgtgacctgccctcgctggaggcgcatgtctccgtcgagcggcag
caggtcgagaaccgccgggactccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctcgaggccgagggtgccaaggccgacgtacgccgcaaggtgcgcgaaggc
gccgagcgggagatgaagcagctgcgcgaccgcgcgcagcgcgagatcgaccgtctcgac
gaggtgtggacccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacgtacttcgacggttcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaagaggccgagaagctccgcgagatc
attcgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacagccccaagggcatggtgctggactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcgccttctcgacctc
ggtgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtggacgcc
ctcttcgacaacggtcgtcgtggtcgcccggtcaccggtcccggtaaccgcccgctgaag
tccctgagcgacatgctcaagggcaagcagggtcgattccgtcagaacctgctcggcaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctcaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgcgaagcgcatggtcgagcgtggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcaccttccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggtgcgctgcgcgacgtcaagggcgag
gagcgttccttctcgtccgtcgccgaggcgatcatggcgttcgacgctggcgagctctcg
ctgcagtcgcgcgtggacatccgcttcccggtgggcaccatcccgccgcgcggctggacc
ccgccggcgcaggaggagggcgagcccgagtggcagcagggtgactcgttccgtctgcgg
acgaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tacgaggtcggcaagaagcagctctcggagatcgtcaacgacctcgccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcgtccggcttcttctgggcgacc
cgttccggcgtcaccgtggccatctccgacatcgtcgttcccgacgcgaagcgtgcgatc
gtcaagggctacgaggcgctggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggaagagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgcgaacttcccgaagaccaacccggtctcgatgatggtcaactcg
ggtgcccgcggaaacatgatgcagatgcgtcagatcgccggtatgcgtggtctggtgtcg
aacgccaagaacgagaccatcccgcgtccgatcaaggcctcgttccgtgagggcctgtcc
gtgctggagtacttcatctccacccacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctcacccgtcgtctggtggacgtctcgcaggacgtcatc
atccgcgaggaggactgcggcaccgagcgcggtctcaagctggccatcgccgagcgcggc
gaggacggtgtgctgcacaaggcggacaacgccgagaccagcgtgtacgcgcgctgcctc
gccgaggacatcgtcgtcgacggcaaggtgctcgccccggcgggcgtcgacctcggtgac
gtcctcatcgaccagctggtcaaggccggcgtcgaggaggtcaagacccgctcggtcctg
acctgcgagtccgccgtcggcacctgcgccatgtgctacggccgttcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcctccggccgcgtgcggatcgaggagaccgagaagaccaagaagatcgtc
attacgccggacgacggcagcgacgagacggcgttcccgatctcgaagcgttcccgtctg
aaggtcgaggagggcgagcacgtcgaggtgggccagcagctcaccgtgggtacccagaac
ccgcacgacgtgctgcgcatcctgggccagcgtgccgtccaggtccacctggtggccgag
gtccagcgggtgtacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctccgccgcgtgacgatcatcgagtccggcgacgccgagctgctgccc
ggcgagctggtcgagcgctcgaagttcgagaccgagaaccgtcgtgtggtgcaggagggc
ggtcacccggcctccggtcgtccgcagctcatgggtatcaccaaggcctcgctggccacg
gagtcctggctgtcggcggcgtccttccaggagacgaccagggtgctgacggacgcggcg
atcaacgccaagtccgactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
accggctccggccaggccgtcccgctggaggactacgactacggtccgtacaaccagtaa
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