Streptomyces galilaeus: CP966_28095
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Entry
CP966_28095 CDS
T06932
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sgal
Streptomyces galilaeus
Brite
KEGG Orthology (KO) [BR:
sgal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgal03016
]
CP966_28095
Enzymes [BR:
sgal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CP966_28095
Transfer RNA biogenesis [BR:
sgal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CP966_28095
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QEU68696
UniProt:
A0A5J6EY40
LinkDB
All DBs
Position
complement(6138229..6139644)
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AA seq
471 aa
AA seq
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MTDAQETAAASSLRTTGGAPPEDDGPTAAGAPTPLLEPREGIPPVIADDAALAEMIAAFA
AGSGPVAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVACPDLSALGEALSSVEWVLH
AATQDLPCLREIGMVPTRLFDTELAGRLAGFPRVGLGAMVEGVLGFVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKDLDRQGKLEWARQEFDAIASAPPPEPRKDPWRRT
SGMHKVRRRRQLGVVRELWETRDRIAQRRDVSPGKVLSDAAIVEAALALPVNAHALAALN
GFGNRMSRRQLEQWQAAVDRARAMSESQLPQPGQSVVGPPPPRAWADKDPEAAARLSAAR
SAVSAVAEEVNMPQENLIAPDTVRRVCWEPPQPVDTASITSALTALGARPWQVEQVTPAL
VAALSAKAAGTTGATGTQPAETAGTPQTAGTPEAGTPGVGAQETGVRQPGA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagaaaccgcagcagccagctcactgcgaaccaccggaggcgcccct
ccggaagacgacggaccgactgctgccggggcgccgacaccgttgctcgaacctcgcgag
ggcattccccccgtgatcgccgacgacgccgccctcgccgagatgatcgccgccttcgcc
gccggctccggccccgtcgccgtggacgccgaacgggcctccggctaccgctacggccag
cgcgcctatctggtgcagctgcgccgcgagggcgccggcaccgcactgatcgaccccgtc
gcctgccccgacctctccgccctcggcgaagcgctctccagcgtggagtgggtcctgcac
gcggccacccaggacctgccctgcctgcgggaaataggcatggtgcccaccagactgttc
gacaccgagctggccgggcggctcgccgggttcccgcgggtcggcctcggcgccatggtc
gagggcgtcctcggattcgtcctggagaagggacactccgccgtcgactggtccacccgc
ccgctccccgagccgtggctgcgctacgccgccctggacgtcgaactcctcgtcgacctg
cgcgacgccctggagaaggacctggaccggcagggcaagctggagtgggcccggcaggag
ttcgacgcgatcgcgtcggcgccgccgcccgagccccgcaaggacccctggcgccgtacg
tccggaatgcacaaggtgcgtcggcgccgtcagctcggcgtggtgcgggagctgtgggag
acccgggaccggatcgcccagcggcgcgacgtgtcgcccggcaaggtgctgtccgacgcg
gccatcgtggaggccgcgctcgcccttcccgtcaacgcccacgcgctggccgcgctgaac
ggcttcggcaacaggatgagccggcgccagctggagcagtggcaggcggccgtcgaccgg
gccagggcgatgagcgagtcacagctgcctcagccgggccagtcggtcgtggggcctccc
ccgccgcgcgcctgggcggacaaggaccccgaggcagcggcccgtctctcggccgcgagg
tcggccgtctcggcggtggccgaggaagtgaacatgccgcaggagaacctgatcgccccg
gacaccgtccggcgggtctgctgggagccgccccagccggtcgacacggcgtcgatcacc
tcggcgctcacggccctgggcgcacgcccctggcaggtggagcaggtgacacccgcgctg
gtggcagccctgtcggcgaaggccgcgggcacgacgggcgctacaggcacacagcccgcg
gagacggccggtacgccgcagacggccggtacgccggaagccggtacgccgggagtcggt
gcgcaggaaaccggagtgcggcagcccggggcgtaa
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