Streptomyces globisporus: WQO_17970
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Entry
WQO_17970 CDS
T04209
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sgb
Streptomyces globisporus
Brite
KEGG Orthology (KO) [BR:
sgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgb03021
]
WQO_17970
Transcription machinery [BR:
sgb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WQO_17970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
HTH_31
HTH_24
Sigma70_ECF
MarR
DUF7343
KORA
DUF134
Motif
Other DBs
NCBI-ProteinID:
ALU95045
UniProt:
A0A0U3BZI9
LinkDB
All DBs
Position
complement(4132271..4133137)
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AA seq
288 aa
AA seq
DB search
MSEEQGSSKVLTLTKSVPAPAVLTSSPEAIDTRTLSRSLFLRLAALGPASGPEGTDSPER
TYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAM
PTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKTSDELAQKLDRSPTVPELARALGVSEE
DVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLAP
RERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLIAD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaacagggcagctcgaaggtgctcacgctcacgaagagcgtgccggcaccc
gccgtgctcaccagctcgccggaagccatcgacacccgcacgctgtcccgctccctgttc
ctgcggctcgccgcgctcggccccgcatcgggccccgagggaacggacagtccggagcgg
acctatgtgcgggacacactgatcgaactgaacctcccgctggtgcggtacgccgcggcg
cggttccgcagccgcaacgagccgatggaggacatcgtccaggtcggcacgatcggcctg
atcaaggcgatcgaccggttcgactgcgaacgcggcgtcgagttcccgacgttcgccatg
cccaccgtcgtcggcgagatcaaacgcttcttccgcgacacctcctggtccgtgcgggtc
ccccgccgcctccaggagctgcggctcgccctgaccaagaccagcgacgagctcgcgcag
aagctcgaccgctcgccgaccgtcccggagctggcccgcgcgctcggggtctccgaggag
gacgtggtcgacggcctcgccgtcggcaacgcctacaccgcctcctcgctcgactcaccc
tcccccgaggacgacggcggcgagggctcgctcgccgaccgcctcgggtacgaggacacg
gcactggagggcgtcgaataccgcgagtccctcaagcccctgctggccaaactcgccccg
cgcgagcgccagatcatcatgctccgcttcttcgcgaacatgacccagtcgcagatcggc
gaggaggtcggcatctcccagatgcacgtctcccggctgctgacccgcacgctcgcgcag
ctcagggaagggctcatcgccgactga
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