Streptomyces globisporus: WQO_21325
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Entry
WQO_21325 CDS
T04209
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sgb
Streptomyces globisporus
Pathway
sgb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WQO_21325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgb03021
]
WQO_21325
03400 DNA repair and recombination proteins [BR:
sgb03400
]
WQO_21325
Enzymes [BR:
sgb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WQO_21325
Transcription machinery [BR:
sgb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WQO_21325
DNA repair and recombination proteins [BR:
sgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WQO_21325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
ALU95628
UniProt:
A0A0U3LHE8
LinkDB
All DBs
Position
4834634..4838533
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQTENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELL
YRELRDRFGTYFDGCMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNKPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDDEGRDVKGA
DRAFGSTAEATMAFDARELSLQAKVDIRFPVGTMPPRGWVPPVAEEGEPEYQPGDTFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAISDVVVPEAKKAIVKGYEEQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLT
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLKIAVKG
ADGVLRKTDDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDALVGAGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAKGRVRIEETEKTKKLVVTPDDGSDETAFPISKRARL
LVGEGDAVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggccttgccaccgcggacgacatc
cggacctggtcgcacggcgaagtcaagaagccggagaccatcaactaccgcacgctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagcttgccgctccc
gtcacccacatctggtacttcaagggcgttccctcgcgcctcggatacctgctggacctc
gcgccgaaggacctggaaaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gaggagcgtcgtacccgcgacctgccgtccctggaggcccacgtctccgtcgagcgtcag
cagaccgagaaccgccgcgacgccgacctggaggcccgggccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgaaggc
gccgagcgtgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggagccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctgcatgggcgccgccgcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacaagcccaagggcatggtgctcgactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgcctcaagcgtctccttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgcccggtcaccggtcccggtaaccgccccctgaag
tccctgagcgacatgctcaagggcaagcagggccgtttccgtcagaacctcctcggcaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctgaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgtggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagccggccgacggccgtcccgtcaccatgccgacccaggac
atggtgctgggcctcttcttcctcaccacggacgacgagggccgcgacgtcaagggcgcg
gaccgcgcgttcggctccacggccgaggccaccatggccttcgacgcccgcgagctgtcg
ctccaggcgaaggtcgacatccgcttcccggtcggcaccatgccgccgcgtggctgggtg
ccgccggtcgccgaggagggcgagccggagtaccagcccggtgacaccttccggctgcgg
accaccctgggccgtgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggcgggcttccactgggcgacc
cgttcgggcgtcaccgtggccatctccgacgtcgtcgtgcccgaggccaagaaggccatc
gtcaagggctacgaggagcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtt
gccgaggcgatgaacgcgaacttcccgaagacgaaccccatcttcatgatggtcgactcg
ggtgcccgaggaaacatgatgcagatgcgtcagatcgcgggtatgcgtggtctggtgtcg
aacgccaagaacgagacgattccccgtcccatcaaggcgtccttccgcgagggcctcacc
gttctggagtacttcatctccacgcacggtgcccgcaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtgatc
atccgcgaggaggactgcggcaccgaccgcggcctgaagctgaagatcgcggtcaagggc
gccgacggcgtgctccgcaagacggacgacgtcgagacctcggtctacgcccgcatgctc
gccgaggacgtcgtggtggacggcaaggtcatcgcgcctgccaacgtcgacctcggtgac
gtcctgatcgacgccctcgtgggcgccggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggcacctgtgccttctgctacggacgctcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctcacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgtgtcgtcgagctcttcgaggcccgtacgccgaagggtgtcgccccg
atctccgaggccaagggccgcgtgcggatcgaggagaccgagaagaccaagaagctcgtc
gtcaccccggacgacggcagcgacgagacggcgttcccgatctcgaagcgtgcccgtctc
ctggtgggcgagggcgacgcggtcgaggtgggccagaagctcaccgtcggtgcgaccaac
ccgcacgacgtgctgcgcatcctcggccagcgtgcggtccaggtccacctggtcggcgaa
gtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctccgccgcgtgacgatcatcgagtccggcgacgcggagctgcttccg
ggcgagctggtcgagcggtcgaagttcgagaccgagaaccgtcgtgtggtcaccgagggc
ggtcaccccgcctctggccgtccgcagctgatgggtatcaccaaggcctcgctcgccacc
gagtcgtggctgtcggcggcgtccttccaggagacgaccagggtcctcaccgacgcggcg
atcaacgccaagtcggactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
acgggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa
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integrated database retrieval system
