Streptomyces globisporus: WQO_23800
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Entry
WQO_23800 CDS
T04209
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgb
Streptomyces globisporus
Pathway
sgb03420
Nucleotide excision repair
sgb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WQO_23800
03430 Mismatch repair
WQO_23800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgb03400
]
WQO_23800
Enzymes [BR:
sgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WQO_23800
DNA repair and recombination proteins [BR:
sgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WQO_23800
MMR (mismatch excision repair)
Other MMR factors
WQO_23800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALU96080
UniProt:
A0A0U2T2T3
LinkDB
All DBs
Position
5373012..5376647
Genome browser
AA seq
1211 aa
AA seq
DB search
MSPRITDPEQLKELLGIPFTPEQTACIVAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIAAGVTDPDVIDPDNPPGEPTISTYHAFAGRLL
TEHGLRIGLEPSTRLLADATRYQLAAKVLREAPGPYPALTRSFSTLVSDLLALDGELSEH
LVRPGTLETYDTELLHELATAKLSNADLRKIPEAAEARRSLLGLTERYRAAKRSRDLLDF
GDQIALSAELALTRPEVGRILREEFRVVLLDEYQDTSVAQRLLLSALFGRGGSGGTEPGV
ADHAAPTGQAAPTGHAAPTGHAAPTGHAVTAVGDPCQAIYGWRGASVANLDDFPEHFPHA
DGTPATRYSLSENRRSGGRLLQLANGLAEPLRAMHEGVEALRPAPGAERDGVVRCALLNT
HTEEVDWLADSLAHLVRTGTPPGEIAVLCRTAGDFPEIQAALVARDIPVEVVGLAGLLHL
PEVADLVAVCEVLQDPGANASLVRLLTGPRWRIGPRDLALLGRRARLLVHRAGHADEADA
DQRLAEAVEGTDPAEVISLADALDTFLVAGDAADDGLPFSAEARVRFARLARELRDLRRS
LADPLMDVLHRVLATTGLEVELSASPQALAARRRETLANFLDTAARFASLDGEASLLAFL
GFLRTAAQYEKGLDNALPGGENTVKVLTAHKSKGLEWDVVAVPGLVTGQFPSGQSRDAWT
AQAKVLPHALRGDAATLPALDSFDAKGIKAFKEEMKEHQHTEELRLGYVTFTRPRSLLLG
SGHWWGPSQKRTRGPSAFLEALYEHCAAGHGEIEAWADEPAEDEENPALAERDADLAWPL
PLDADALARRRAARDTVLAHLERMAVRGDEQAPAYAPGPGDVPAHEPWDDEPPLDEPPAD
EDWDWDALPTERPPGPWETEPDPVDTASEPPPHTEAAPDTASEPAPHTGPPPHIPAARHP
QEDPAARHAPETTEPADRLTPEEARTLASWDRDLDSLAGELRRARATVREVVIPAALSAT
QLLRLAEDPDAFARELARPMPRPPQPAARRGTRFHAWVESRYEELPLPLLGPDELPGGDE
SDAEIADERDLAELKEAFERTAYARRTPYRVETPFQITLAGRVIRGRIDAVYRTGDTYEI
VDWKTTRHRTADPLQLAVYRLAWAELHDLPLDAVTATFLYVRTGETVHPQGLPGRAELER
ILLDEPDPDGG
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccacgcatcaccgatcccgagcagctcaaggagctcctcgggattccgttcacc
ccggagcagacggcctgcatcgtcgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcgggcaagaccacggtgatggccgcccgcgtggtctggctggtgggcaccggacag
gtcgcgcccgagcaggtcctcggcctcaccttcaccaacaaggcggcgggcgagctggcc
gagcgcgtccgcaaggcgctgatcgccgccggggtcaccgaccccgacgtcatcgacccg
gacaaccccccgggcgagcccaccatctccacctaccacgcgttcgccggccgcctcctc
accgagcacggcctgcgcatcggcctggagccctccacccgcctcctcgccgacgccacc
cgctaccagctggcggccaaggtgctgcgcgaggccccgggcccgtatccggcgctcacc
cggtccttctccaccctggtcagcgatctgctcgcgctcgacggggagctgtccgaacac
ctcgtacggccggggacgctggagacgtacgacaccgagctgctgcacgagctggccacc
gccaagctcagcaacgccgacctgcgcaagatccccgaggccgccgaggcccgccgctcg
ctcctcggcctcaccgagcgctaccgggccgccaagcgcagccgggacctgctggacttc
ggcgaccagatcgcgctctccgccgagctggccctgacccggccggaggtcgggaggatc
ctgcgcgaggagttccgggtcgttcttctcgacgagtaccaggacacgtcggtggcgcag
cggctgctgctctcggcgctgttcggcagaggcggcagcggtggtacggagccgggggtg
gccgaccacgcggctcccaccggccaggcggctcccaccggccacgcggctcccaccggc
cacgcggctcccaccggccacgcggtgaccgccgtgggcgacccctgccaggcgatctac
ggctggcgcggcgcgtccgtcgccaacctcgacgacttccccgagcacttcccgcacgcc
gacggcacccccgccacccgctacagcctcagcgagaaccggcgcagcggcggacgtctc
ctccagctcgccaacggcctcgccgagccgctgcgcgcgatgcacgagggcgtcgaggcg
ctgcgccccgcgccgggcgccgaacgcgacggcgtggtccgctgcgccctcctgaacacg
cacaccgaggaggtcgactggctcgccgactccctcgcccacctcgtccgcaccggcacc
ccgcccggcgagatcgccgtcctgtgccgcaccgccggggacttccccgagatccaggcg
gccctggtcgcccgggacatcccggtcgaggtcgtcggcctcgccggactgctccacctg
cccgaggtcgcggacctggtggccgtctgcgaggtcctccaggacccgggggccaacgca
tccctggtccggctgctgaccggaccgcgctggcgcatcggcccccgtgacctcgcgctc
ctcggccgccgcgcccgccttctcgtccaccgggccggccacgcggacgaggccgacgcg
gaccagcggctcgcggaggccgtcgagggcacggacccggccgaggtgatatcgctcgcg
gacgcgctggacaccttcctggtcgcgggggacgcggccgacgacgggctgccgttctcc
gccgaggcccgcgtccgcttcgcccgcctcgcccgggagttgcgcgacctgcgccgctcg
ctcgcggaccccctgatggacgtcctgcaccgggtcctggccaccaccggtctggaggtc
gagctgtccgcgtccccgcaggcgctggccgctcgccgccgcgagaccctggccaacttc
ctcgacacagcggcccggttcgcctcgctggacggagaggcgtcgctgctcgccttcctc
ggcttcctgcgcaccgccgcgcagtacgagaagggcctcgacaacgcgctgcccggcggc
gagaacaccgtcaaggtcctcaccgcccacaagtccaaggggctggagtgggacgtcgtc
gccgtccccggactggtcacgggccagttccccagcggccagtcccgggacgcctggacc
gcccaggccaaggtgctcccacacgccctgcgcggcgacgcggcgacgctcccggccctc
gacagcttcgacgccaaggggatcaaggcgttcaaggaggagatgaaggagcaccagcac
acggaggaactgcgcctcggctacgtcaccttcacccgcccccgctccctgctcctcggc
tccggccactggtggggcccgtcccagaagcggacgcgcggcccttccgccttcctggag
gcgctgtacgagcactgcgcggcgggccacggcgagatcgaggcctgggcggacgagccc
gccgaggacgaggagaacccggccctcgcggagcgcgacgccgacctggcctggccgctc
ccgctcgacgccgacgccctggcccgccgccgcgccgcccgggacacggtcctggcccac
ctggagcgcatggccgtccggggggacgagcaggcaccggcgtacgcccccggacccggc
gacgtaccggcgcacgaaccctgggacgacgagcctccgctcgacgagcccccggccgac
gaggactgggactgggacgcgctccccaccgaacgccccccgggcccgtgggagaccgaa
ccggacccggtggacacggcctccgagccgcccccacacaccgaggccgcaccggacacg
gcctccgagccggccccgcacaccgggccgcccccccacatcccggccgcccgccacccg
caggaggatccggccgcccgccacgccccggaaaccaccgaaccggccgaccggctcacc
cccgaggaggcccgcaccctcgcctcctgggaccgggacctggactccctcgccggagag
ctgcgccgcgcccgcgccaccgtgcgcgaggtggtcatccccgccgccctctccgccacc
cagctgctgcgcctggccgaggaccccgacgccttcgcccgcgagctggcccgccccatg
ccccgccccccgcagcccgccgcccgccggggcacccggttccacgcctgggtcgagtcc
cggtacgaggagctgccgctgcccctgctgggccccgacgagctgcccggcggcgacgag
agcgacgccgagatcgccgacgagcgggacctcgccgagctgaaggaggcgttcgagcgc
acggcgtacgcccggcgcaccccgtaccgggtggagacccccttccagatcaccctggcg
ggccgcgtgatccggggccggatcgacgccgtctaccgcacgggcgacacctacgagatc
gtcgactggaagaccacccgccaccgcaccgccgacccgctccagctcgccgtctaccgg
ctggcctgggccgagctgcacgatctgccgctcgacgcggtcaccgccacgttcctctac
gtacgcacgggcgagaccgtccatccgcaggggctgcccggccgggcggagctggagcgg
atcctgctggacgagccggaccccgatggcggatag
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