KEGG   Streptomyces globisporus: WQO_24120
Entry
WQO_24120         CDS       T04209                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
sgb  Streptomyces globisporus
Brite
KEGG Orthology (KO) [BR:sgb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgb03021]
    WQO_24120
Transcription machinery [BR:sgb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WQO_24120
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 MarR_2 PF0610-like_N HTH_24 HTH_10 HTH_AsnC-type HTH_3 DUF7343 Sigma70_ECF MarR HTH_Crp_2 NirdL-like_HTH DUF722 IF2_N DUF8073_C HTH_ParB GerE HTH_AraC HTH_28 DUF4423 Cro
Other DBs
NCBI-ProteinID: ALU96136
UniProt: A0A0U3LK54
LinkDB
Position
complement(5441998..5442927)
AA seq 309 aa
MRDETIRSGVVRPAGIPEQQARPHPEDGADGPEGFDVAVEQQSQAERAGQMSEHGHHDPH
DRSGARALFFELRELPDGSAEKAELRNRLVRMHLPLVEHLARRFRNRGEPLDDLTQVATI
GLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATAEL
SQQHGRSPTVHELAERLGISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGSEDE
ALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQ
LRERLLVEE
NT seq 930 nt   +upstreamnt  +downstreamnt
gtgcgggacgagacgatccgatccggggtggtgcgcccagcaggcatcccggagcaacag
gcccggccgcatccggaggacggagcggacgggcccgagggcttcgacgtcgcggtggag
cagcagtcgcaggcagagcgggcgggccagatgagcgagcacgggcaccacgatccacac
gaccgcagcggggcccgggccctgttcttcgagctgcgggagctgcccgacggttcggcg
gagaaggcggagctgcgcaaccggctggtgcgcatgcatctgccgctggtggagcacctg
gcccggcggttccgcaatcgcggcgagccgctggacgacctgacgcaggtcgccacgatc
gggctgatcaagtccgtggaccggttcgacccggaccggggggtggagttctcgacgtac
gccactcccacggtggtcggcgagatcaagcgccacttccgggacaagggctgggcggtg
cgggtgccgcgccgcctccaggagctgcgtctctcgctgaccacggccaccgcggagctc
tcccagcagcacggccgttcgccgaccgtgcacgagctggcggagcggctcggtatctcc
gaggaggaggtgctggagggcctggagtcggccaacgcgtacagcacgctctcgctggac
gtgccggacacggacgacgagtcgccggccgtggcggacaccctgggctcggaggacgag
gcgctggagggcgtggagtaccgggagtcgctcaagccgctcctggaggacctgccgccg
cgcgagaagcggatcctgctgctgcgcttcttcgggaacatgacccagtcgcagatcgcc
caggaggtcggcatctcgcagatgcacgtctcgcggctgctggcccgtaccctggcgcag
ctgcgcgagcggctgctcgtcgaggagtga

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