Streptomyces globisporus: WQO_24620
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Entry
WQO_24620 CDS
T04209
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sgb
Streptomyces globisporus
Pathway
sgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WQO_24620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgb03021
]
WQO_24620
03019 Messenger RNA biogenesis [BR:
sgb03019
]
WQO_24620
Transcription machinery [BR:
sgb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
WQO_24620
Messenger RNA biogenesis [BR:
sgb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WQO_24620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALU96224
UniProt:
A0A0U2T389
LinkDB
All DBs
Position
5552028..5554055
Genome browser
AA seq
675 aa
AA seq
DB search
MSDTTDLMGVTADKNVDSAAPAEGAATGTTARRRRSGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGGSAAPKASSKAAEAPAEAESKPKRRATSKARTGDEGAAAAE
KSTAAQQQIDIPGQPASDDQPAGERRRRRATAQAGSPDTKTEAKTEVKAKAEPEVQQKTE
ERAEPKGDARAENATDTAEGRRGDRQGQGRGDREGRRERQRDRRGKGDDQGQQGGGGQRP
QRQGQGQGQQNRDNGPQDDFDDEAGGRRGRRGRYRDRRGRRGRDDFAGDVQVADDDVLIP
VAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVRQPKDGERREKF
NALVRLDSVNGMAPESGRGRPEFQKLTPLYPQDRLRLETDSNVLTTRIIDLVAPIGKGQR
GLIVAPPKTGKTMILQAIANAITVNSPECHLMVVLVDERPEEVTDMQRSVKGEVISSTFD
RPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTA
LYPPKRFFGAARNIEDGGSLTILATALVETGSRMDEVIFEEFKGTGNMELKLDRKLSDKR
IFPAVDVDASSTRKEEILLGTDELAVVWKLRRVLHALDQQQAIELLLDRMKKTQSNAEFL
LQIQKTTPGSGNGND
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgtcactgccgacaagaacgtcgacagcgccgcg
cccgccgaaggtgctgccactggcaccaccgcacggcgccgccgctccggcaccggcctc
gagggcatggtcctggccgagctgcagcaggtcgcgtccggcctcggcatcaggggcacc
gcgcggatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggcgggtggcgga
tccgccgcccccaaggcctcctccaaggccgcagaggcccccgccgaggcggagagcaag
cccaagcgccgcgcgacctccaaggcgcgcaccggggacgagggcgctgccgccgccgag
aagagcacggccgcgcagcagcagatcgacatccccggccagccggccagcgacgaccag
cccgcgggcgagcgccgtcgccgccgtgccaccgcgcaggcgggcagccccgacaccaag
accgaggcgaagaccgaggtcaaggcgaaggcggagcccgaggtgcagcagaagaccgag
gagcgggccgagcccaagggcgacgcccgggccgagaacgccaccgacacggccgagggc
cgtcgcggcgaccgccagggccagggccgcggtgaccgcgagggccgccgtgagcgccag
cgcgaccgtcgcggcaagggcgacgaccagggccagcagggcggcggcgggcagcgcccg
cagcgccagggccagggtcagggccagcagaaccgtgacaacggtccgcaggacgacttc
gacgacgaggcgggaggccgccgcggccgccgtggccgctaccgcgaccgccgcggccgc
cgtgggcgcgacgacttcgccggcgatgtgcaggtggccgacgacgacgtcctgatcccc
gtcgcgggcatcctggacatcctcgacaactacgcgttcatccggacctccggctacctg
ccgggcccgaacgacgtgtacgtctcgctcgcccaggtccgcaagaacggcctgcgcaag
ggcgaccacgtcaccggcgcggtgcgccagcccaaggacggcgagcggcgcgagaagttc
aacgcgctggtccgcctcgactcggtcaacggcatggcgccggagtccggccgcggccgc
cccgagttccagaagctgaccccgctctacccgcaggaccggctccgtctggagaccgac
tccaacgtcctgacgacgcggatcatcgacctggtggccccgatcggcaagggccagcgc
gggctcatcgtggccccgccgaagaccggcaagaccatgatcctgcaggccatcgccaac
gcgatcacggtcaacagccccgagtgccacctgatggtcgtcctggtcgacgagcgtccg
gaagaggtcaccgacatgcagcggtcggtgaagggcgaggtcatctcctcgaccttcgac
cgtccggccgaggaccacaccaccgtcgccgagctggccatcgagcgcgccaagcgcctc
gtcgagctgggtcacgacgtggtcgtcctgctcgactcgatcacccgcctgggccgcgcg
tacaacctcgcggcgccggcctccggccgcatcctctccggtggtgtcgactcgaccgcg
ctgtaccccccgaagcgcttcttcggcgccgcgcgcaacatcgaggacggcggctcgctg
accatcctggccaccgcgctcgtcgagaccggctcgcgcatggacgaggtgatcttcgag
gagttcaagggcaccggcaacatggagctcaagctcgaccggaagctctcggacaagcgc
atcttcccggcggtggacgtcgacgcgtcctccacccgtaaggaagagatcctgctcggc
accgacgagctggcggtcgtctggaagctgcgccgggtgctgcacgcgctcgaccagcag
caggcgatcgagctcctcctggaccggatgaagaagacccagtccaacgcggagttcctg
ctccagatccagaagacgacgccgggcagcggaaacggcaacgactga
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