Streptomyces globisporus: WQO_25970
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Entry
WQO_25970 CDS
T04209
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sgb
Streptomyces globisporus
Pathway
sgb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WQO_25970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgb03400
]
WQO_25970
Enzymes [BR:
sgb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WQO_25970
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WQO_25970
DNA repair and recombination proteins [BR:
sgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WQO_25970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALU96473
UniProt:
A0A0U3LWA9
LinkDB
All DBs
Position
5864820..5865680
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVSGRTVTEVEVLHPRSVRRHLAGGVDFAARLRGARFGPALRRG
KYLWVPIEEASASLLGHLGMSGQLLVQPADAPDEKHLRIRMRFDDALGTELRFVDQRTFG
GLSLHGNTPDGLPDTIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSLISGVGNI
YADEALWRAKLHYDRPTATLTRPKSAELLGHARDVMNAALAQGGTSFDSLYVNVNGESGY
FDRSLDAYGREGEPCNRCSTPMRRRAWMNRSSYYCPRCQRPPRASS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaagtcgtccgcaggggacttgagcgctgggtcagcggc
cgcaccgtcaccgaggtcgaggtcctgcacccgcgctcggtccgccggcacctcgcgggc
ggcgtcgacttcgccgcccggctgcgcggggcccgcttcggtccggcgctgcggcgcggc
aagtacctctgggtgccgatcgaggaggcctccgcctcgctgctgggccacctcgggatg
agcggacagctgctggtgcagcccgcggacgcgcccgacgagaagcacctgcggatccgg
atgcggttcgacgacgccctcggcaccgaactgcgcttcgtcgaccagcgcaccttcggc
gggctctcgctgcacggcaacacccccgacggactgcccgacaccatcgcgcacatcgcc
cgggacccgctcgacccgctcttcgacgacgccgcgttccacaccgcgctgcggctgcgc
cgcaccaccgtcaagcgcgccctgctcgaccagtcgctcatcagcggcgtcggcaacatc
tacgccgacgaggcgctctggcgggccaagctgcactacgaccggccgaccgcgaccctg
acccgccccaagtccgccgagctgctcggccacgcccgcgacgtcatgaacgcggccctc
gcccagggcggcaccagcttcgacagcctgtacgtcaacgtgaacggcgagtccggctac
ttcgaccggtcgctcgacgcgtacggccgggagggcgagccctgcaaccggtgctcgacc
ccgatgcgccgccgcgcctggatgaaccgctccagctactactgcccccgctgtcagcgg
ccgccgcgcgcctcgtcgtaa
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