Streptomyces globisporus: WQO_27005
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Entry
WQO_27005 CDS
T04209
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
sgb
Streptomyces globisporus
Pathway
sgb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WQO_27005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgb03021
]
WQO_27005
Transcription machinery [BR:
sgb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WQO_27005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HC2
FAM199X
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-ProteinID:
ALU96661
UniProt:
A0A0U3C4F6
LinkDB
All DBs
Position
6115866..6117413
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AA seq
515 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILEEEGVTLMVSAAESPKRARKSVAAKSPAKRTATKTVAAKTTVTRTVAATAAPTAESAD
AVADDAVVAAPAKKAAAKKTAAKKTAVKKTAAKKTAAKKSGKQDEELLDGDEPVEEVKAG
KGEEEEGEGENKGFVLSDDDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEVEL
AKRIEAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGR
GMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMV
EVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDS
EFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIG
KVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgaatctgtgatg
gcgctcatcgagcggggaaaggctgatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaacgttctgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagtcgccgaagcgcgcc
cgcaagagcgtcgcagcgaagagcccggccaagcgcaccgccaccaagaccgtcgcggcg
aagaccaccgtgaccaggaccgtcgcggccaccgccgccccgacggccgagagtgcggac
gcggtggccgacgacgccgtcgtggccgcaccggcgaagaaggcggcggccaagaagacc
gccgccaagaagacagccgtgaagaagacggcggccaagaagaccgccgccaagaagtcc
ggcaagcaggacgaagaactcctcgacggcgatgagccggtcgaggaggtcaaggccggc
aagggcgaggaagaggagggcgagggcgagaacaagggcttcgtcctctccgacgacgac
gaggacgacgcacctgcccagcaggtcgccgtcgccggcgccaccgccgacccggtcaag
gactacctgaagcagatcggcaaggttcccctcctcaacgccgagcaggaggtcgagctc
gccaagcgcatcgaggccggtctcttcgccgaggacaagctggcgaacgccgacaagctc
gccccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgggccaagaac
cacctcctggaggccaacctccgcctggtggtctccctggccaagcgctacaccggccgc
ggcatgctcttcttggacctgatccaggagggcaacctcggtctgatccgcgcggtcgag
aagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgtcag
gcgatcacccgcgcgatggccgaccaggcccgcaccatccgtatcccggtgcacatggtc
gaggtcatcaacaagctcgcgcgtgtgcagcgccagatgctccaggacctgggccgcgag
cccaccccggaggagttggccaaggaactcgacatgacccccgagaaggtcatcgaggtc
cagaagtacggccgcgagccgatctcgctgcacaccccgctcggcgaggacggcgacagc
gagttcggtgacctgatcgaggactccgaggcggtcgtcccggccgacgcggtgagcttc
acgctcctccaggagcagctccactcggtgctcgacacgctctccgagcgtgaggccggc
gtggtctcgatgcgcttcggcctcaccgacggtcagccgaagacgctcgacgagatcggc
aaggtctacggcgtgacgcgtgagcgcatccgtcagatcgagtcgaagacgatgtcgaag
ctccggcacccgtcgcgctcccaggtccttcgcgactacctggactag
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