Selenobaculum gibii: P3F81_04510
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Entry
P3F81_04510 CDS
T09332
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sgbi
Selenobaculum gibii
Brite
KEGG Orthology (KO) [BR:
sgbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgbi03032
]
P3F81_04510 (topA)
03400 DNA repair and recombination proteins [BR:
sgbi03400
]
P3F81_04510 (topA)
Enzymes [BR:
sgbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P3F81_04510 (topA)
DNA replication proteins [BR:
sgbi03032
]
Prokaryotic type
DNA Topoisomerases
P3F81_04510 (topA)
DNA repair and recombination proteins [BR:
sgbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P3F81_04510 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Ycf1
Motif
Other DBs
NCBI-ProteinID:
WIW71571
UniProt:
A0A9Y2AKF2
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All DBs
Position
960629..962863
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AA seq
744 aa
AA seq
DB search
MSKVLVVVESPAKAKTIEKYLGKNYVVKASMGHLRDLPKSQFGIDVENNFSPKYINIRGK
GDLIKSLKSAAKSADKVFLASDPDREGEAIAWHLAHILNVDEDEKCRIVFNEITKPAIQN
AVKSPRPINIDRVDAQQARRMLDRIVGYKLSPLLWRKVRKGLSAGRVQSVTVKLICDREK
EIQSFISEEYWTIDTKLREKVKSPMFDAELITIDGEKLAVNNEKVATEICDALEKQTFVV
KEVKKRQRQRKALPPFITSSLQQDASRKLGFTSRKTMMLAQQLYEGLELGRKGPVGLITY
MRTDSTRVSDLAQQEVRDYVNAEFSAEYLPEKPPVYSTKKSQDAHEAIRPTSIIYTPDSI
EKYLSKDQYKLYRLIWERFVASQMAPAIYDTLTIQISAGKYGLKATGSQLKFPGFRAVYI
ESKEQDKDVTLPELAIDQVIKLQKVLPKQHFTEPPPRYNEASLVKTLEEKGIGRPSTYSP
IIETILGRGYVVRVDKKFEPTELGFVVVDMLKEYFETIVDAEFTAGLENQLDEIAEGKID
KNQLLEEFYEPFAKTLEHAEEAIGHVELPEEISDIPCEHCGRMMVVKQGRYGKFLACPGF
PECRNTKPLLKDTGVICTKCGGAIVERRSKRGKHFYGCKNYPECDFVSWDMPLKENCEVC
GAFMLKHNYKNGRFITYCSNEECTSRIDHPINKELEKNKKKTQEQAEKKENADVALDNSK
KSGKTKTTQKKSTKKTSRKKAEEK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaagtattagtggttgtagaatctccggcaaaagcaaagacaattgaaaaatat
ttagggaaaaattatgttgttaaagcttcaatggggcatttacgtgacttgccaaaaagt
caatttgggatagatgttgaaaataattttagccctaagtatattaatattcgaggtaaa
ggagatctaatcaaatcgctgaaaagtgcagcgaaaagcgctgataaagtatttcttgca
tctgacccagaccgtgaaggggaagctattgcatggcatttagcgcatattttaaatgtt
gacgaagatgaaaagtgccgtattgtatttaatgagataacaaaacctgcgattcaaaat
gctgtaaagtcaccacgaccgattaatatagatcgagtcgatgcacaacaggcacggaga
atgttagatagaattgtcggatataaattgagtcctttgttgtggagaaaagttcgtaaa
ggattgagcgctggtagggttcagtctgtaacggtaaaattgatttgcgatcgagaaaaa
gaaatccaaagttttatttctgaagagtattggacaattgatacgaaactacgtgaaaaa
gtaaaaagcccgatgtttgatgcggaattaattaccattgacggagaaaagttggcggta
aataatgaaaaggtagcaactgagatttgcgatgctttagaaaagcaaacattcgttgta
aaggaagtaaagaagcgccaaagacaacgaaaagcattgccaccatttattacgagtagt
ttacagcaagatgcatcacgaaaacttggttttacatcaagaaaaacgatgatgttagcg
caacaactttatgaagggttagagctggggcgcaaagggccagtgggtttgattacttat
atgcgtacggattctacacgcgtatctgatcttgcacagcaagaggtacgagattatgtg
aatgcagaatttagtgcagaatacttgccagaaaaaccccctgtatattctacaaagaaa
tcacaggatgcgcatgaagcaattcgtccgacaagtataatctatacgccggatagcatt
gaaaaatacctatcaaaagatcaatacaaattgtatcgcttaatttgggagcgttttgtt
gccagtcaaatggcaccagcgatttacgatacattaacaattcaaatttcagcaggaaaa
tatggtctaaaagcaacaggatcacagctaaaatttccgggttttagagcggtatatata
gaatcaaaagagcaagataaagatgttactttgccagagttagcgatagatcaagtaata
aaattgcaaaaggttttacctaaacagcactttactgagccacctccgcgctataatgag
gcatctttagtaaaaacgcttgaggaaaaaggaattggtagacctagtacttattcaccc
attattgaaacaattttaggaagaggctatgttgtccgcgtagataagaagtttgaaccg
acagaacttggttttgtcgttgtagatatgctgaaagagtattttgaaacaattgttgat
gcggaatttactgcagggttagaaaatcagttagatgagattgcagaaggaaaaattgat
aaaaatcaattgttagaagaattttatgagccatttgcgaaaacgcttgagcatgctgaa
gaagcaattgggcatgtcgaacttccagaggaaatttcagacattccatgtgagcattgt
ggcagaatgatggttgtaaagcaaggacggtatggaaaatttttagcatgtcctggtttt
cctgagtgtagaaatacaaaacctttattaaaagatacaggggttatttgtacaaaatgt
ggaggggcaattgttgaacggcgtagtaaacgcggaaagcatttttatgggtgtaaaaac
tatccggaatgcgactttgttagctgggatatgccgttaaaagaaaactgtgaagtttgt
ggtgcttttatgttaaagcacaattataaaaatggtcgatttattacttattgtagtaat
gaagagtgtacatcaagaatagatcatccgattaataaagagctagaaaaaaataaaaag
aaaacgcaagaacaagctgagaaaaaagaaaatgcagatgtagccttagataattcaaaa
aaatcaggaaaaacaaagacgacgcagaaaaagtcaacgaaaaagacatcgcgtaagaaa
gcggaggaaaagtag
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