Anaerosinus gibii: P3F81_07095
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Entry
P3F81_07095 CDS
T09332
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sgbi
Anaerosinus gibii
Pathway
sgbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P3F81_07095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgbi03019
]
P3F81_07095
03009 Ribosome biogenesis [BR:
sgbi03009
]
P3F81_07095
Enzymes [BR:
sgbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P3F81_07095
Messenger RNA biogenesis [BR:
sgbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P3F81_07095
Ribosome biogenesis [BR:
sgbi03009
]
Prokaryotic type
rRNA helicases
P3F81_07095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WIW69690
UniProt:
A0A9Y2AHU9
LinkDB
All DBs
Position
complement(1463962..1465542)
Genome browser
AA seq
526 aa
AA seq
DB search
MKKDITTFGEIVLSKKVLAAISDMGFEEPSPIQSQTIPLVLEGHDVIGQAQTGTGKTAAF
GIPTIERIIDGNRHIQALVLTPTRELAIQISEEFTKIGKYKKVKTLPIYGGQSIDRQIRA
LKYGVQIVIGTPGRLLDHIRRNTIKLNAVKTLILDEADEMLDMGFVDDIEAILEQLSSTE
RQTLLFSATMPAPIAKLAEKYMTNPKKVTISRENLTVPLIDQIYYETREKLEGLCRVLDV
EETGKIIIFCRTKKGVDDLVASLQARGYMSDGLHGDLSQSQRDRVMKKFRDGKLEILVAT
DVAARGIDIDDITHVVNYDIPQDHESYVHRIGRTGRAGKKGVAITFIEPREYRQLKLIER
LAKTKLVRKQLPSSADILERQREIIKTRLLKTLENNNFADYHTIVSDLTVDYDLIDVAAA
ALKLSVEGFKEKEEEPISKIENTGGAPGMVRLFMNIGRSQKIRPEDIVRAFASEADIPGN
IIGVINIYDRFTFVEVPEDVAERVLSVMHKNTVKGYKINVEPAKSR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagatataactacatttggtgaaattgttttaagtaaaaaggtattagcggca
attagtgatatgggttttgaagaaccatccccaattcaaagccaaacgattccgctagtt
ttagaggggcatgacgtcattggtcaagcgcagacaggtacggggaaaaccgcagctttc
gggattccaacgattgaacgtatcattgatgggaatcgtcatattcaagctttagtgctt
acgccaacacgcgaacttgctattcaaatatcagaagaattcactaagattggaaaatat
aaaaaagtaaaaactttaccgatttatggtggacaatctattgatcgacagattcgtgct
ttaaaatacggagttcagattgttattggaacaccgggaagattattagatcatattcga
cgtaatacaataaaattgaatgctgtaaaaacattgattttagatgaagccgatgaaatg
ttagatatgggattcgttgatgatattgaagcgattttagagcagttatcatcaacagaa
cgtcagactttacttttttccgcaacaatgccagctccaattgcaaaattagcagaaaaa
tatatgacaaatccaaagaaagtaacaattagccgggaaaatttaactgtacctttgatt
gaccaaatttattatgaaacaagagaaaaactagaaggtttatgtcgtgttcttgatgta
gaagaaacaggaaaaatcattattttctgtcgaactaaaaaaggcgtagatgatttagtg
gcatcattacaggcacgtggctatatgtctgatggattacatggtgatttaagccaatct
caacgtgatcgtgtaatgaaaaagtttagagatggaaaattagaaattcttgttgctacc
gatgttgcggcacgtggaatagatattgatgatattacacatgttgttaactatgacatc
ccgcaagatcatgaatcttatgtacatcgtattggacgtacaggacgtgccgggaaaaaa
ggtgttgcaattacttttattgaaccgagagaatatcgtcaattaaaattaattgaacgt
ttagcaaagacaaaacttgttcgtaagcaattaccttcttcggcagatattttagaacgt
caacgtgaaattattaaaacacgtttacttaaaacactggaaaataataattttgctgat
tatcatacaatcgtgtccgatttaactgtagattatgatttaattgatgttgcagccgca
gcacttaaattatctgttgaagggtttaaagaaaaagaggaagagccaatttcaaaaatt
gagaatacaggtggcgcacctggaatggtacgattatttatgaatatcgggcgtagtcaa
aaaattcgtccggaagatatcgtacgcgcatttgcttcagaagcggatattcccggaaat
attattggggtaattaatatttatgaccgatttactttcgttgaagtgccagaagatgtg
gctgagcgtgttttatcagtaatgcataaaaatacagtgaaaggttataaaattaatgta
gaaccagcaaaaagtagataa
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