Selenobaculum gibii: P3F81_09895
Help
Entry
P3F81_09895 CDS
T09332
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgbi
Selenobaculum gibii
Pathway
sgbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P3F81_09895 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgbi03019
]
P3F81_09895 (recQ)
03400 DNA repair and recombination proteins [BR:
sgbi03400
]
P3F81_09895 (recQ)
Enzymes [BR:
sgbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P3F81_09895 (recQ)
Messenger RNA biogenesis [BR:
sgbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P3F81_09895 (recQ)
DNA repair and recombination proteins [BR:
sgbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P3F81_09895 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WIW70198
UniProt:
A0A9Y2AIC0
LinkDB
All DBs
Position
2057148..2059283
Genome browser
AA seq
711 aa
AA seq
DB search
MFSQAKQILKRFYGYDSFRPGQEKIIKSFLAGEDTVAIMPTGAGKSICFQVPALLLDGCT
LVISPLISLMKDQVDALINQGIPATYINSSLSSAELNRRLYDISAGKYKLIYVAPERLSA
DFFQTCLIKTTISMIAIDEAHCLSQWGHDFRPSYQLIYPFIRQLPKRPLIGAFTATATPE
VKDDIINLLGLYHPNIQVSGFDRPNLYFNVLRGENKQKFILHYVKTHASQSGIIYAATRK
EVDAIFALLSSKGYKAGHYHAGLSDEERIREQDRFLYDDIQVMVATNAFGMGIDKSNVRY
VIHYNMPRNMEAYYQEAGRSGRDGEPGECTLLFSPQDTMLQKFLIDKSVENPDRKQHELS
KLQTMVDYCHTPNCLRNYIISYFGETDAPTSCDNCSNCTDESELIDITVDAQKVFSCILR
LNERFGITMIAEVLKGSQNKKLLQFRFDKLSTYGLFANRTVNDIKLLIQRLIATQYLMLT
ESEYPVVRLTSLAYTVLKGDQSVWQKVIKTKQVASDDLLFQELRKLRKEIADAEKIPPYQ
VFADSTLHEMCKYQPTTLEAMQDIKGVGEVKLNKYGQFFITAIRVFTPEDTVSSPSKTME
KPPSTSEPKTPTHLLTLNLFTQGLSLTEIANERSLTTATVFNHLVKAANENCVVDWDRFI
RPEYEEQILNVIHKLGPAPLRPLKDELPEEITYDEIKAVIAKHFAKSSNKN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttttcacaggctaaacaaattttaaagcgcttttatggctacgatagtttccgcccc
ggtcaagaaaaaatcatcaagagtttcctagctggcgaagataccgttgctatcatgccg
acaggtgccggtaaatctatttgctttcaagtcccggcacttctgcttgatggctgtaca
cttgttatttcccctttaatttccctaatgaaagaccaagtagatgccctcataaatcaa
ggaatacctgctacttatatcaacagctctctttcctctgctgaattaaatcgtcgtcta
tacgatatttccgcaggtaagtacaaactgatctatgttgctccagagcgtttgtccgca
gattttttccaaacctgcctaattaaaactacaattagtatgattgcaatagatgaagcc
cactgtctttctcaatgggggcatgattttcgaccaagttatcaactcatctacccgttt
attcgtcaattgccaaaacgtccattaatcggcgcatttactgcaacagctacccctgag
gttaaagacgatatcatcaatttactcggactttatcatccgaacattcaggtaagtggt
tttgaccgtcctaatttgtactttaatgtattacgcggggaaaacaaacaaaaattcatt
ctccattatgtcaaaactcacgcttctcaatcaggaattatttatgctgcaacacgcaaa
gaagtcgatgcgatttttgctttattatcaagtaaaggctataaagcaggacattatcat
gcgggtttaagtgatgaagaacgcattcgtgaacaagatcgctttctttatgatgacatt
caagtcatggttgctaccaatgcctttggtatgggaatcgacaaatccaatgttcgttat
gttattcattataatatgccacgcaatatggaagcatattatcaagaagccggacgtagt
ggtcgcgatggcgagcccggggaatgtacccttctattcagcccacaagatacaatgcta
caaaaatttctgattgacaaatctgtagaaaacccagatcgcaaacaacatgaattaagc
aaattacaaacgatggtcgattattgccacaccccaaactgtttaagaaattatattatt
tcgtattttggcgaaaccgatgccccaacaagttgcgataattgtagcaattgtacagat
gaaagcgaattaattgacattaccgtagatgcgcaaaaagtattttcctgtattcttcgt
ttaaatgaacgttttggaatcaccatgattgccgaggtcttaaagggatcacaaaataaa
aaattattgcaatttcgttttgacaaattatctacctatggcttatttgcaaatagaacg
gtgaatgatatcaagctcttaattcaacgattaattgccacacaatatctcatgcttaca
gaaagtgaatatccagttgttcgccttacttctttggcttatactgttttaaaaggagac
caaagcgtctggcagaaggtaataaaaacaaaacaagtagcctcagatgaccttttattt
caagaacttcgtaagttgcgtaaagaaattgcagatgcagaaaaaattcctccatatcaa
gtctttgctgatagcacccttcatgaaatgtgtaaatatcaaccgacaacactagaagca
atgcaggatattaaaggtgttggcgaagtcaaactaaacaaatacggacaatttttcatt
acagccattcgtgtatttacccctgaagatacagtatcttccccatcaaaaacaatggaa
aagccaccttcaaccagcgaaccaaaaacccctacccatttacttacacttaacttattc
acccaagggctttcattgacggaaatcgcaaatgaaagatccttaaccaccgcaacggtt
tttaatcatttagtcaaagctgcaaatgaaaattgtgttgtcgattgggatagatttatt
cgccctgaatatgaagagcaaattctaaacgttattcacaaactgggccccgcaccgctt
cgcccattaaaggacgaactgccagaagaaatcacttatgatgaaatcaaggcagtgatt
gcgaaacattttgctaaatcatcgaataaaaactaa
DBGET
integrated database retrieval system
