Streptococcus agalactiae GD201008-001 (serotype Ia): A964_0314
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Entry
A964_0314 CDS
T02248
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sgc
Streptococcus agalactiae GD201008-001 (serotype Ia)
Pathway
sgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A964_0314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgc03019
]
A964_0314
Messenger RNA biogenesis [BR:
sgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A964_0314
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
dUTPase
KH-I_KHDC4-BBP
KH_PNO1_2nd
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AFS45115
LinkDB
All DBs
Position
328258..329865
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AA seq
535 aa
AA seq
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MFNIILAMVCALIGLIIGYVAISMKMKSSKEAAELTLLNAEQDAVDLRGKAEIEAEHIRK
AAERESKAHQKELLLEAKEEARKYREEIEKEFKSDRQELKQMEARLTDRASSLDRKDENL
SNKEKMLDSKEQSLTDKSRHINEREQEIATLETKKVEELSRIAELSQEEAKDIILADTEK
DLAHDIATRIKEAEREVKDRSNKIAKDLLAQAMQRLAGEYVTEQTITTVHLPDDNMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLESLIQDGRIHPARIE
ELVEKNRLEMDQRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
LAGILAGELGENVDLARRAGFLHDMGKAIDREVEGSHVEIGMEFARKYKEHPIVVNTIAS
HHGDVEPDSVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIANGFEGVQNAFALQ
AGREIRIMVQPGKVSDDQVVIMSHKVREKIEQNLDYPGNIKVTVIREMRAVDFAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatattatattagcaatggtttgtgcactcattggtttgattattggttatgtg
gctatttcaatgaaaatgaaatcatcaaaagaagctgcagaactaactcttttaaatgca
gaacaagatgccgttgatttacgtggtaaagcagaaattgaagcagaacacatccgtaaa
gcagcggaacgtgaaagtaaagctcaccaaaaagaattacttttagaagcaaaagaagag
gctagaaaatatcgtgaagagatcgaaaaggaatttaaatctgatagacaagagttgaaa
cagatggaggcacgtttaacagatcgtgcatcatctcttgatcgtaaagatgaaaatcta
tctaacaaagaaaaaatgttagatagcaaagaacaaagtctaaccgataaatctagacat
attaatgagcgcgaacaggaaattgctactttagaaacaaaaaaagtagaagaattgtca
cgcatcgcagagcttagtcaagaagaagctaaagatatcattttagctgataccgaaaaa
gatttagctcatgatattgcgacacgtattaaagaagcagaacgtgaagtaaaagatcga
tcaaacaagatagcaaaagacttgctagcccaagctatgcaacgtttagctggtgaatat
gttactgaacaaacaattacaactgttcatctccctgatgataatatgaagggacgtatc
attggtcgtgaaggacgtaatattcgtactctggaaagtttgacaggtattgatgttatc
atagatgatacgccagaagtcgttgtcttatcaggtttcgaccccattcgtcgtgaaatt
gctcgtatgactttagaatctttgattcaagatggacgtatccatccagctcgtattgaa
gagttggttgaaaaaaatcgtttggaaatggatcaacgtatccgtgagtatggtgaggca
gcagcttatgagattggtgcaccaaatctgcatcctgatttgataaaaattatgggacgt
ttgcagttccgtacatcatatggtcaaaatgtacttcgtcattcagttgaagttggtaaa
cttgcaggtattttggctggagaactaggagaaaatgttgatttagctcgtcgggctgga
ttcctccatgatatggggaaagctattgatcgcgaagttgaaggcagtcacgttgaaatt
ggtatggaatttgctcgtaagtacaaagagcatccgattgttgttaatactattgcaagc
caccatggtgatgtagaacctgacagcgttattgcagtaattgttgctgctgcagacgcc
cttagttcagcacgaccaggtgcgcgtaatgagtcaatggaaaattatatcaaacgtctg
cgtgatttagaagaaattgctaatggctttgagggagtgcaaaatgcctttgcacttcaa
gccggacgtgaaattcgtatcatggtacaacctggtaaagtttctgatgatcaagtagtt
attatgtcgcataaggtacgtgaaaaaatcgaacaaaacttggattatccaggtaatatt
aaggtaacagttattcgtgaaatgcgagctgttgattttgcaaaatag
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