Streptococcus agalactiae GD201008-001 (serotype Ia): A964_0779
Help
Entry
A964_0779 CDS
T02248
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sgc
Streptococcus agalactiae GD201008-001 (serotype Ia)
Pathway
sgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A964_0779 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgc03019
]
A964_0779 (deaD)
03009 Ribosome biogenesis [BR:
sgc03009
]
A964_0779 (deaD)
Enzymes [BR:
sgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A964_0779 (deaD)
Messenger RNA biogenesis [BR:
sgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A964_0779 (deaD)
Ribosome biogenesis [BR:
sgc03009
]
Prokaryotic type
rRNA helicases
A964_0779 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFS45555
LinkDB
All DBs
Position
806024..807610
Genome browser
AA seq
528 aa
AA seq
DB search
MKFTELNLSQDILSAVEKAGFVEPSPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIHTEDNTIQALIIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HVVVGTPGRLLDLIKRKALKLNHIETLILDEADEMLNMGFLEDIEAIISRVPETRQTLLF
SATMPDPIKRIGVKFMKDPEHVKIKATELTNVNVDQYYVRVKENEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDHIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVSPNEMGYLTIIENLTKK
RMTGMKPATASEAFQAKKKVALKRIARDFEDQELVSKFDKFKADALELATQYTPEELALY
VLSLTVQDPESLPEVEITREKPLPFKPSGGGFKGKGGRGNGRGGDRRRNDRGDRRGNRDR
DDRGGRCDFKRRDDKFKKDNRRQENKKPHKNTSSEKQTGFVIRNKGDK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaacttaacttatcgcaagatattctttcagcggtagaaaaagcaggc
tttgtagagccatcaccaatccaagaaatgactatcccacttgctcttgaaggcaaagat
gtcattggtcaagcgcagacaggtacaggaaaaactgcagcttttgggttaccaacttta
aataaaattcatactgaagataatactatccaagcacttattattgctcctacacgtgaa
cttgcagtacaatcacaagaagaattgttccgttttggacgcgataaaggtgttaaggtc
cgctctgtttatggtgggtcaagtattgaaaaacaaatcaaggcattacgttcaggagca
cacgttgttgttggaactccaggtcgattacttgatttaattaaacgtaaagcacttaaa
cttaatcacattgaaactcttattcttgatgaagcagacgaaatgcttaacatgggattt
ttagaggacattgaagcaatcattagtcgtgtaccagaaacacgtcaaactcttttattc
tcagcgacaatgcctgatccaatcaaacgtatcggggttaaattcatgaaagatcctgag
catgttaaaattaaagcaactgaattaactaatgtgaatgttgatcagtattatgttcgt
gttaaggaaaatgaaaaattcgatactatgacacgtttgatggacgttgatcaaccagaa
ttgtcaattgtctttggacgtacgaaacgtcgtgtagatgaattaactcgtggactaaaa
ttacgtggtttccgagcagaaggaattcatggagacttagatcaaaataaacgtcttcgt
gttatcagagactttaaaaatgaccatattgatattcttgttgccacagatgttgctgcg
cgtggtttagatatttcaggcgttacacatgtttacaactatgatattccccaagatccc
gaaagttatgttcaccgtattggacgtactggtcgtgctggtaaatctggtcaatctatc
acttttgtttcaccaaacgaaatgggatatttgacaattattgaaaacttaactaaaaaa
cgtatgactggaatgaagcctgctactgcaagcgaagcatttcaggctaagaaaaaagtt
gcattgaaacgtattgcacgtgactttgaggatcaggaattagtttctaaatttgataaa
tttaaagccgatgctttagaattagcaactcaatacacaccagaagaacttgctctttat
gtcttaagcttaacagttcaggatccagaatcgttaccagaagttgaaatcacacgtgaa
aaaccattaccatttaaaccatcaggtggtggctttaaaggtaaaggtggacgaggcaat
ggccgtggtggcgatcgtcgacgcaatgatcgtggtgatcgtcgtggaaatcgtgaccgt
gatgatcgtggtggtcgttgtgattttaaacgtcgtgatgataagttcaagaaagataat
cgtcgtcaagaaaataaaaaacctcataaaaacacttcaagtgaaaaacaaactggattt
gttattcgcaacaaaggcgataaataa
DBGET
integrated database retrieval system
