Streptococcus agalactiae GD201008-001 (serotype Ia): A964_1693
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Entry
A964_1693 CDS
T02248
Symbol
cbf
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sgc
Streptococcus agalactiae GD201008-001 (serotype Ia)
Brite
KEGG Orthology (KO) [BR:
sgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgc03019
]
A964_1693 (cbf)
Messenger RNA biogenesis [BR:
sgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A964_1693 (cbf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
UPF0154
tRNA_anti_2
PaaX
Motif
Other DBs
NCBI-ProteinID:
AFS46452
LinkDB
All DBs
Position
complement(1735591..1736532)
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AA seq
313 aa
AA seq
DB search
MKINQMKKDELFEGFYLIKKAEVRKTRAGKDFIAFTFQDDTGEISGNMWDAQTYNVEEFV
AGKIVHMKGRREVYNGTPQVNQITLRNIKDGEPNDPRDFKEKPPINVDNVREYMEQMLFK
IENATWQRVVRALYRKYNKEFFTYPAAKTNHHAFESGLAYHTATMVRLADSIGDIYLELN
KSLMFAGIMLHDLAKVIELSGPDNTEYTIRGNLIGHISLIDEELTKILAELNIDDTKEEV
TVLRHVILSHHGQLEYGSPVRPRIMEAEIIHMIDNIDANMMMMTTALNRVNEGEMTNRIF
AMDNRSFYKPNIK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaccaaatgaaaaaagacgagctttttgaggggttttaccttataaagaaa
gcagaagttcgtaaaacgcgtgcaggtaaagactttattgcctttacctttcaagatgat
actggcgaaatttcaggaaatatgtgggatgcacaaacctataatgtagaagagtttgta
gccggtaaaattgttcatatgaaagggcgtcgtgaagtttataatggaactccccaagtc
aaccaaattacattaagaaacatcaaagatggtgaacctaatgatcctagagattttaaa
gaaaaacctccaatcaatgttgacaacgtgagagagtacatggaacaaatgctctttaaa
attgaaaatgcaacctggcagcgtgtggtaagagcactttatcgtaaatacaataaggaa
ttttttacctatccagccgccaaaacaaaccaccacgcctttgaatcaggattggcatat
cacacggcaacgatggttcgtttggcagatagtatcggagatatctatctagaacttaat
aaaagtttgatgtttgctggtattatgctacatgatttagccaaggtcattgagttatcg
ggtcctgataatacagaatatactattcgaggtaatcttatcggtcatatttcacttatt
gatgaggaattaacaaaaatactagcagagcttaatattgatgatacaaaagaagaggtt
acagtgttacgccatgttattctgagtcatcatggacaattagaatatggaagcccggtt
cgtcctagaatcatggaggcagaaattatccatatgatcgataacattgatgcaaatatg
atgatgatgacaacagctttaaaccgtgtcaacgaaggtgaaatgacaaatcgcattttt
gccatggataaccgttctttttataaaccgaacattaaataa
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