Streptococcus agalactiae GD201008-001 (serotype Ia): A964_1920
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Entry
A964_1920 CDS
T02248
Symbol
hspD1
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sgc
Streptococcus agalactiae GD201008-001 (serotype Ia)
Pathway
sgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A964_1920 (hspD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgc03019
]
A964_1920 (hspD1)
03110 Chaperones and folding catalysts [BR:
sgc03110
]
A964_1920 (hspD1)
03029 Mitochondrial biogenesis [BR:
sgc03029
]
A964_1920 (hspD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgc04147
]
A964_1920 (hspD1)
Enzymes [BR:
sgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A964_1920 (hspD1)
Messenger RNA biogenesis [BR:
sgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A964_1920 (hspD1)
Chaperones and folding catalysts [BR:
sgc03110
]
Heat shock proteins
HSP60 / Chaperonin
A964_1920 (hspD1)
Mitochondrial biogenesis [BR:
sgc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A964_1920 (hspD1)
Exosome [BR:
sgc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A964_1920 (hspD1)
Exosomal proteins of other body fluids (saliva and urine)
A964_1920 (hspD1)
Exosomal proteins of breast cancer cells
A964_1920 (hspD1)
Exosomal proteins of colorectal cancer cells
A964_1920 (hspD1)
Exosomal proteins of bladder cancer cells
A964_1920 (hspD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4142
Motif
Other DBs
NCBI-ProteinID:
AFS46671
LinkDB
All DBs
Position
complement(1955157..1956779)
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AA seq
540 aa
AA seq
DB search
MAKDIKFSADARSAMVRGVDILADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE
TAVSAAVEELKEIAQPVSGKEAIAQVAAVSSRSEKVGEYISEAMERVGNDGVITIEESRG
METELEVVEGMQFDRGYLSQYMVTDNEKMVSELENPYILITDKKISNIQEILPLLEEVLK
TNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVVT
EDLGLDLKDATMQVLGQSAKVTVDKDSTVIVEGAGDSSAIANRVAIIKSQMEATTSDFDR
EKLQERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALVNV
IEKVAALKLNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANG
EWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPEAPTAPAMDPSMMGGF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattttcagcagatgcccgctcagcaatggtgcgtggtgttgat
attttagctgatacagtcaaagtaacattaggtcctaaaggccgtaatgttgttcttgaa
aaagcatttggttcgcctttaattacaaatgatggtgtgacaattgctaaagaaattgag
ctagaagatcactttgaaaatatgggagctaaacttgtgtcagaagtggcttcaaaaact
aatgatattgcaggggatggcactacaactgctactgttttgacccaagctattgtacgg
gaaggtcttaaaaatgtaactgcaggggcgaatccgattggtattcgtcgtggtattgaa
acagctgtttcagcagcagttgaagagctaaaagagattgcacaaccagtttcaggcaaa
gaagctattgctcaagttgcagctgtgtcttcacgttctgaaaaagttggggaatatatt
tctgaagctatggagcgcgtgggtaatgatggtgttatcactattgaagaatcgcgaggt
atggaaacagagcttgaagttgtagaaggaatgcagtttgaccgtgggtacttgtcacag
tatatggtaactgataacgagaaaatggtctctgaacttgagaatccgtatatccttatt
acagataagaaaatttcaaatatccaagaaattttaccattattagaagaggttcttaaa
acaaatcgtccattgctaatcatcgctgatgatgttgatggagaagctctcccaacgctt
gttcttaataaaattcgtggaactttcaatgtcgtagctgttaaagcgcctggatttggt
gatcgtcgtaaagccatgctggaagatattgctatcctaacaggaggaactgtcgttact
gaagaccttggtttagacttaaaagatgctactatgcaagttttaggacagtctgctaaa
gtaacagtagataaagattctactgttattgtcgaaggtgccggtgactcatcagcaatt
gctaatcgcgtagctatcattaagtcacagatggaggctacaacttctgattttgatcgt
gaaaaattacaagaacgacttgccaagttagccggtggtgtagcagtaattaaagttggt
gcagcgactgaaacagaattaaaagagatgaaacttcgcatcgaagatgcgttaaatgca
acgcgtgctgcagttgaagaaggtattgtttcaggtggaggtacggctcttgtgaacgtt
attgaaaaagtagcggcactgaaacttaatggtgatgaggagactggacgtaatattgtt
cttcgtgctctcgaagagcctgttcgtcaaattgcttacaatgctggatatgaaggttca
gttattattgaacgtttaaaacagtctgaaattggtacaggatttaatgcggctaatgga
gaatgggtagatatggttaccacaggtatcattgaccctgtcaaagtaacacgttctgca
cttcaaaatgcggcatctgtagcaagtcttatcttgactacagaagcagtagtagcaaat
aaacctgaaccagaagctcctacagctcctgcaatggatccatctatgatgggtggcttc
taa
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