Streptomyces griseoviridis: ELQ87_08480
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Entry
ELQ87_08480 CDS
T06660
Name
(GenBank) rhamnogalacturonase B precursor
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sgd
Streptomyces griseoviridis
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ELQ87_08480
Enzymes [BR:
sgd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
ELQ87_08480
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
DUF4278
DUF4340
Motif
Other DBs
NCBI-ProteinID:
AZS84319
UniProt:
A0A3S9Z9G2
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Position
1978088..1979767
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AA seq
559 aa
AA seq
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MSEPVQHAVGRRTFVVGGAAAAGSAVLAGPLARPASAAAFGWSDDGSHYVVDTGASLVFR
VSKSNGDLTSLVYKGTEYQGYGGMNSHIESGLGASTVTISQTGSTILVSVTYGTLKHYYA
ARSGENNVYLWTNKADTSVSATRYIVRVKAGLFANDEPDSYTYAPTTVEASDVFRKSDGQ
TRSKHFSRLRVTDYDYIGWSTGGVGLYVVRSNHEKASGGPFYRSLLRHQSADGGGLYEIL
YYGENQTEAQRFGLQGPYVIAFTDGGAPSSALYPANLTTPWADGLGISGYVAASGRGRVA
GVGITGRDPAFPYTVGLANSAAQYWGSARASDGYFSVTGVLPGTYTLTVFKGELAVYTTS
VAVTAGGTTTLNSIAVPTSNDPGNASAIWRIGSWDGTPGGFKNAELMTYAHPSDVRAASW
TGNVVVGSGTETSAFPCYLWKDVNSGIIVYFKLTAAQAAAAHTLRIGVTTAYANGRPQIT
VNDTWTSAVPSPPTQPSTRSLTVGSYRGNNYTFTYSVPASAWLTDTGAYNTLKIYVASGS
GTTSFLSAGTAIDAIDLLI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccgtgcagcacgcggtgggacgccgcaccttcgtcgtcggcggcgcggcg
gcggccggcagcgcggtcctcgccggaccgctcgcccgcccggcgtccgccgcggccttc
ggctggagcgacgacggctcccactacgtcgtcgacaccggagcgagcctcgtcttcagg
gtcagcaagtccaacggcgacctgacctcactggtctacaagggcaccgagtaccagggc
tacggcggcatgaactcgcacatcgaatcgggcctgggcgcctcgacggtgacgataagt
cagaccgggagcaccatcctcgtctccgtcacgtacggcacgctcaagcactactacgcg
gcccgcagcggcgagaacaacgtctacctgtggaccaacaaggccgacacctcggtcagc
gccacccgctacatcgtgcgcgtcaaggcgggcctgttcgccaacgacgagcccgactcc
tacacctacgcgcccaccaccgtcgaagcctccgacgtcttcaggaagtccgacggccag
acccgctccaagcacttctccaggctgcgcgtcaccgactacgactacatcggctggagc
accggcggcgtcggcctctacgtcgtgcgctccaaccacgagaaggcgtcgggcggcccg
ttctaccgctcgctgctgcgccaccagagcgccgacggcggtggcctgtacgagatcctc
tactacggcgagaaccagacggaggcccagcgcttcggcctccagggcccgtacgtcatc
gccttcaccgacggcggggcgccgtcctccgcgctctaccccgccaacctcaccacgccc
tgggccgacgggctcggcatctccgggtacgtcgccgcgagcggtcggggccgggtcgcg
ggcgtcgggatcaccggccgcgacccggcgttcccgtacaccgtcgggctcgccaactcg
gccgcccagtactggggttcggcccgcgcctcggacggctacttctccgtcaccggcgta
ctgcccggcacctacacgctcaccgtcttcaagggcgaactcgccgtgtacaccacctcg
gtggcggtcacggcgggcggcacgacgaccctcaacagcatcgccgtccccacctcgaac
gacccgggcaacgcgagcgcgatctggcggatcggctcctgggacggcacccccggcggc
ttcaagaacgccgagctgatgacgtacgcgcatccgtccgacgtccgggccgcctcctgg
acggggaacgtcgtcgtcggcagcggcaccgagacctcggcgttcccctgctacctgtgg
aaggacgtcaacagcgggatcatcgtctacttcaagctgacggcggcccaggcggcggcc
gcccacaccctgcggatcggggtgacgacggcctacgccaacggccgcccgcagatcacc
gtcaacgacacctggacctcggccgtcccctccccgcccacccagccgagcacccggtcg
ctgaccgtgggctcctaccggggcaacaactacacgttcacctacagcgttccggcgtcc
gcctggctgacggacaccggcgcctacaacacgctgaagatctatgtggcgagcggctcg
ggcacgacgtcgttcctcagcgcgggcacggcgatcgacgcgatcgacctgctgatctga
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