Streptomyces griseoviridis: ELQ87_09660
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Entry
ELQ87_09660 CDS
T06660
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
sgd
Streptomyces griseoviridis
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgd03400
]
ELQ87_09660
DNA repair and recombination proteins [BR:
sgd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
ELQ87_09660
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Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
AAA_34
GAP1-M
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AZS84521
UniProt:
A0A3Q9KMS3
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Position
2245205..2246833
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AA seq
542 aa
AA seq
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MTAWSPGLSFQAVLDSAPMPYIRERLGKHMCALLDLIDGGSTGDERLRAVAAVAVDAEKL
VSNQTDREELLRLLPADKQTELAQRLGADGAGTDALVYLNGLKWASEQQRELLEFFGFSV
DRAPALPPLFRQDSEPEYGLFPHQRRAAARVKELLYDGPRRVVLHLPTGVGKTRTGMNLI
ADHLRQHEPTLVVWLARGQELLEQAAVEFERAWSKLGDRPLAVVRMWGEAPTDVEALTDG
LVILGLEKAVSADKSDPELLRKLASRSTLTVFDEAHQIIAPTYQRVVDALTVRPDASLLG
LTATPGRTWADVTQDERLSDFFARQKVMLQIDGYSNPVTALIEQGYLAKPIMKTVASEAG
LHLSARDQQLLAKSFDIPSEIIASLASDEQWNLKVVQTVLELLERQHRRILVFAASVDHC
RLIAAVLSALGLDADFVTGESSPRHRNDAIRRFKGAGRRPMILCNFGVLTTGFDAPAASA
AIIARPTKSLVLYSQMVGRVIRGPKAGGTATCEIVTVVDPELPGFGDVAEAFTNWEDVWE
TA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgtggtcgcccggcctgtccttccaagccgtactggacagcgctcccatgccg
tacatccgagagcggctcggcaagcacatgtgcgctctgctcgacctcatcgacggcgga
agcaccggcgatgagcggctccgggcagtcgccgccgtggcggtggacgccgagaagctc
gtgtccaatcagacagaccgcgaggagctgctgcggctcctccccgccgacaagcagaca
gagcttgcccaacgccttggagcggatggcgcgggcaccgatgccctggtctacctgaac
ggtctgaagtgggcgagtgagcagcagcgggaactgctggagttcttcggcttcagcgtc
gacagggcgcctgcgctgcccccgctctttcggcaggactccgaacccgagtacgggctg
ttcccccaccaacggcgcgcagccgcacgcgtgaaggagctgctgtacgacggaccgcgg
cgggttgtcctccacctgccgacaggcgtgggcaagacccgtaccggaatgaacctgatc
gccgaccatctgcggcagcacgagcccacgctcgtggtctggctggcgcgtgggcaggag
ctgctggagcaggcggctgtggagttcgagcgcgcgtggtccaagctcggcgaccgtccg
cttgcggtcgtccggatgtggggtgaggcgcccaccgatgtggaggcgctgacagacggc
cttgtcatcctggggctggagaaggccgtctccgcggacaagagcgatccggagcttctc
cgcaaactcgcatcgcgcagcaccctcacagtcttcgacgaggctcatcagatcatcgcg
ccgacctaccagcgagtggtggacgccctcaccgtccgccccgatgccagcttgctgggc
ctgacggccacccccggccggacctgggcggacgtcacgcaagatgagcggctgtcggac
ttcttcgcccgccagaaggtcatgctgcagatcgacggatacagcaacccggtaaccgcc
ctcatcgaacagggctacctggccaagcccatcatgaagaccgtcgcctccgaagccggc
ctgcatctgtccgcgcgtgatcagcagctgctcgcgaagtccttcgacatcccgtcggag
atcatcgcgtcgctggccagcgacgagcagtggaacctcaaagtcgtccagaccgtgctg
gagctactggaacgccagcaccgcaggatcctggtattcgcggcctccgttgaccattgc
cgcctgatcgccgccgtcctgtcggcgctcggcctcgatgccgacttcgtcaccggcgag
tcctcgccccggcaccgcaacgatgccatcagacgcttcaagggcgccggccgacgcccc
atgattctgtgcaacttcggggtcctgaccacaggcttcgatgccccggcggccagtgct
gccatcatcgcccgaccgaccaagtcgctggtcctgtacagccagatggtcggccgggtc
atccgcggccccaaggccggaggaaccgcaacctgcgagatcgtcaccgtcgtcgacccg
gagctgcccgggttcggggacgtggccgaggcattcaccaactgggaagacgtatgggag
accgcgtga
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