Streptomyces griseoviridis: ELQ87_10685
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Entry
ELQ87_10685 CDS
T06660
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELQ87_10685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgd03019
]
ELQ87_10685
03400 DNA repair and recombination proteins [BR:
sgd03400
]
ELQ87_10685
Enzymes [BR:
sgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ELQ87_10685
Messenger RNA biogenesis [BR:
sgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ELQ87_10685
DNA repair and recombination proteins [BR:
sgd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ELQ87_10685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
AZS84700
UniProt:
A0A3S9ZAK1
LinkDB
All DBs
Position
2477353..2479518
Genome browser
AA seq
721 aa
AA seq
DB search
MEHTSSTELRAAADTVLARLVGDATGTARLREDQWRAIEALVAHGRRALVVQRTGWGKSA
VYFVATSLLRARGSGPTVIVSPLLALMRNQVEAAARAGIHARTINSSNIEEWGTVQAEIA
AGQVDVLLVSPERLNNPDFRDEVLPALAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
GDLPSGVPVLATTATANARVTADVAEQLGTGGSSDALVLRGPLDRESLSLGVLRLPDAAH
RMAWLADHLDELPGSGIIYTLTVAAAEEVTAFLRHRGHTVASYTGKTENADRQQAEDDLL
ANKVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGRE
DEAIWEYFASLAFPSEELVRRTLDVLARAERPLSLPALEPLVELRRSRLESMLKVLDVDG
AVKRVKGGWISTGQPWAYDAERYAWVARQRGAEQQAMRDYASTSGCRMEFLQRQLDDEGA
KPCGRCDNCAGARFTVDMSPAALDAARVDLGRAGVEVEPRRMWPTGLPAVGVDLKGRIPA
GEQAAEGRALGRLSDIGWGNRLRPMLAPTAPDGPLPDDVAHAVVGVLVDWAKGPGGWASG
AAGAQQRPVGVVTVASRTRPQLVGSLGARIAEVGRLPLLGSLEYTGDTTHVSRSNSAQRL
KALDGALSVPPALASALAEAQGPVLLVDDFTETGWTLAVAARMLRRAGAQGVLPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagcagcacggaactccgggcggcggccgacaccgtcctcgcccgcctc
gtcggggacgcgaccgggacggcccggctgcgcgaggaccagtggcgggcgatcgaggcg
ctggtcgcgcacggccgccgggcgctcgtcgtgcagcgcaccggatggggcaagtccgcc
gtctacttcgtggcgacctcgctgctgcgggcgcggggcagcgggccgacggtgatcgtg
tcccccctcctcgcgctcatgcgcaaccaggtcgaggccgccgcgcgggccggtatccac
gcgcggaccatcaactcctccaacatcgaggagtggggcacggtccaggccgagatcgcg
gccggtcaggtggacgttctcctggtctcgcccgagcggctcaacaaccccgacttccgc
gacgaggtgctgcccgcgctcgccgcggccaccgggctcctcgtggtggacgaggcgcac
tgcatctccgactggggacacgacttccgccccgactaccggcggctgcgcaccatgctg
ggcgacctcccgtccggcgttccggtcctcgcgaccacggcgaccgccaacgcgcgcgtg
acggccgacgtggcggaacagctgggcaccggaggctcgtccgacgccctggtgctgcgc
ggtccgctggaccgggagagcctgagcctcggtgtgctgcgcctgcccgacgcggcgcac
cggatggcctggctcgccgaccacctcgacgagttgccgggctccgggatcatctacacg
ctgaccgtggccgccgccgaggaggtcaccgccttcctgcggcaccgggggcacaccgtc
gcctcgtacacggggaagacggagaacgccgatcggcagcaggccgaggacgatctgctc
gccaacaaggtgaaggcgctggtcgccacgtccgcgctcggcatgggcttcgacaagccg
gacctcggattcgtggtgcacctcgggtcgccgtcgtcgccgatcgcctactaccagcag
gtgggccgtgcggggcgcggtgtcgagcacgccgaagtactgctgctgcccggccgggag
gacgaggcgatctgggagtacttcgcctcgctcgccttcccctccgaggagctggtgcgg
cgcaccctggacgtcctcgcccgcgcggagcgccccctgtcgctgcccgccctggaaccg
ctggtggagctgcggcgctcccgccttgagtcgatgctgaaggttctcgacgtcgacggc
gcggtcaagcgggtcaagggcggctggatctccaccgggcagccgtgggcctacgacgcc
gagcggtacgcctgggtggcgcgccagcgcggggccgagcagcaggccatgcgcgactac
gcgtcgacgagcggctgccggatggagttcctccagcggcagttggacgacgagggcgcc
aagccctgtggccgctgcgacaactgcgcgggggcccggttcaccgtggacatgtctccc
gccgcgctggacgcggcgcgtgtcgacctcggccgggccggtgtcgaggtggagccgcgc
cgcatgtggccgaccgggctgcccgcggtcggcgtggacctcaagggccggatcccggcg
ggcgagcaggccgccgaggggcgcgcgctgggacggctctcggacatcggctggggcaac
cggctgcgccccatgctcgcgcccacggcccccgacggccccctgccggacgacgtggcg
cacgccgtcgtcggggtcctcgtcgactgggccaaggggcccggtggctgggcgtcgggg
gcggcgggcgcgcagcagcggccggtgggggtcgtcacggtcgcctcacgcacgcgtcct
cagctggtcggttcgctgggcgcgcgcatcgcggaggtcggcaggctgccgttgctgggc
tcccttgagtacacgggcgacaccactcatgtctcgcgcagcaacagcgcgcagcgtctc
aaggcgctcgacggggcgttgagcgtgccgcccgcgctggcctccgctctcgccgaagcc
caggggccggtgctgctggtggacgacttcaccgagacggggtggacgctcgcggtcgcg
gccaggatgctccgcagggccggcgcgcagggggtgctgcccctcgtgctggccgtacag
ggctga
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