Streptomyces griseoviridis: ELQ87_13495
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Entry
ELQ87_13495 CDS
T06660
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd03420
Nucleotide excision repair
sgd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ELQ87_13495
03430 Mismatch repair
ELQ87_13495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgd03400
]
ELQ87_13495
Enzymes [BR:
sgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ELQ87_13495
DNA repair and recombination proteins [BR:
sgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ELQ87_13495
MMR (mismatch excision repair)
Other MMR factors
ELQ87_13495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZS85197
UniProt:
A0A3S9ZC80
LinkDB
All DBs
Position
complement(3115633..3119229)
Genome browser
AA seq
1198 aa
AA seq
DB search
MPSRITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVRAGVTDPDAIDPDNPPGEPVISTYHAFAGRLL
TDHGLRIGLEPTSRLLADATRFQLAARVLREAPGPYPALSRSFADLVGDLLALDAELSEH
LVRPEELRAHDAELLRALESARLTNADLRRIPEAAAARRELADLVTRYRAAKRDRDLLDF
GDQIALSARLAGIPEVGRVLRDEFRVVLLDEYQDTSVAQRILLAGLFGDGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPAHFAHADGRPATRQSLSENRRSGGRLLDLANGLAEPLRAL
HAGVEALRPAPGAERDGRVRCALLPTHAEELDWLADSLAHLVRTGTAPGEIAVLCRTAAD
FAEIQGALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQDPGANAALVRLLTGPRWRIG
PRDLALLGRRARHLVAHARVDAGDDPDRRLAGAVEGVDPAEVISLADALDTFLELPLDAG
HQDDRLPFSPDARVRFARLAAELRDLRRSLADPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDIAASFAAGDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHR
SKGLEWDVVAVPGLVTGTFPSTQGREKWTAQGRVLPHALRGDADTLPDLASWDSRGLKSF
QEAMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPHQKKRRGPSDFLEALYEHCARGFG
EIEVWADQPAEDAENPALHRADADQVWPLPLDETALAHRRRAAATVLDHLKALASADGDH
QHDHGHGQGGGPGHPHPVAVHDPDSHDDPDWPPPPDDETFDDGPYPDDEPYPGDEPYTGE
EPYPDEDEDAAGWDAWPTDRPAVPHQAAPTGPGHARVRPTREPPRARRQEHERPRTTPEE
ARAIASWDRDLDALTGELLRAREAVTDVPLPASLTVSQVLRMAADPDGFAQELARPMPRP
PQPAARRGTRFHAWIEARFEALTLPVLEPDELPGAEAEIADEQDLEHLKDAFERTEYAHR
TPHRVEAPFQIAIAGRVIRGRIDAVYRDGEGDEARYEIVDWKTARTHSADPLQLALYRLA
WAEQHGIEAESVAAAFVYVRDGEVVRPENLPGRAGLERLLLAEAKCDEPPPEDVRAGR
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
gtgccctcccgtatcaccgaccccgagcagctcaaagagctcctcggcatccccttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
ggttcgggcaagacgacggtgatggcggcgcgcgtggtgtggctggtcggcaccggccag
gtcgcccccgagcaggtcctcggcctcaccttcaccaacaaggccgcgggcgaactcgcc
gagcgggtccgcaaggcgctggtccgcgcgggcgtcaccgacccggacgccatcgacccc
gacaacccgccgggcgaacccgtcatctccacctaccacgccttcgcgggccgcctgctg
accgaccacggcctgcgcatcggcctggaaccgacgtcccggctgctcgccgacgcgacc
cggttccagctcgccgcgcgcgtgctgcgcgaagcccccggcccctacccggcgctcagc
cgctccttcgccgacctggtcggagacctgctcgccctcgacgccgaactctccgaacac
ctggtgcgccccgaggagctgcgcgcccacgacgccgagctgctgcgcgccctggagagc
gccaggctcaccaacgccgacctgcgcaggatcccggaggccgccgccgcccgccgcgaa
ctggccgacctggtgacccgctaccgcgccgccaaacgggaccgcgacctcctcgacttc
ggcgaccagatcgccctgtccgcgcgcctcgccggcatccccgaggtgggccgcgtgctg
cgcgacgagttccgggtcgtcctcctcgacgagtaccaggacacctcggtggcccagcgc
atcctgctggccggcctgttcggcgacggcaccggccaccccgtcaccgccgtcggcgac
ccctgccaggcgatctacggctggcgcggcgcctccgtcgccaacctggacgacttcccc
gcccacttcgcccacgccgacggccgcccggccacccgccagtcgctcagcgagaaccgc
cgcagcggcggccggctcctcgacctcgccaacggcctcgccgaaccgctgcgcgccctg
cacgcgggcgtggaggcgctgcgccccgccccgggcgccgagcgcgacggccgggtgcgg
tgcgcgctgctgcccacccacgccgaggaactcgactggctcgccgactccctcgcccac
ctcgtcaggaccgggacggcacccggcgagatcgccgtcctgtgccgcaccgcggccgac
ttcgccgagatccagggcgccctcgtcgcccgggacgtccccgtcgaggtcgtcggcctc
tccgggctgctgcaccttcccgagatcgccgacctggtcgccgtctgcgaggtgctccag
gaccccggcgccaacgccgccctggtccgcctgctgaccggcccgcgctggcgcatcggc
ccccgcgacctcgccctcctgggccgccgcgcccggcatctcgtcgcccacgcgcgcgtg
gacgccggtgacgacccggaccgacggctcgccggagccgtcgagggcgtcgaccccgcc
gaggtgatatcgctcgcggacgccctggacaccttcctcgaactgcccctcgacgccggg
caccaggacgacaggctgcccttctcgccggacgcgcgcgtgcgcttcgcccgcctcgcc
gccgaactgcgtgacctgcgccgctcgctcgccgacccgctgatggacgtcctgcaccgc
gtcctcgccgtcaccggcctcgaggtggagctgtccgcgtccccgcacgcgctggccgcc
cgccgccgcgagaccctctccaacttcctcgacatcgccgcctccttcgccgcgggcgac
ggcgaggccacgctcctcgccttcctcggcttcctgcgcaccgccgcccagtacgagaag
ggcctcgacaacgcgctgccgggcggcgagaacaccgtcaaggtgctcaccgcgcaccgc
tccaagggcctggagtgggacgtcgtcgccgtccccggcctggtcaccggaaccttcccc
agcacccagggccgcgagaaatggaccgcccagggcagggtcctgccgcacgccctgcgc
ggcgacgccgacaccctccccgacctcgcgtcctgggactcccgcggcctgaagtccttc
caggaggccatgaaggagcaccagcacaccgaggaactccgcctcggctacgtcaccttc
acccgcccccgctccctgctcctcggctcgggccactggtggggaccccaccagaagaag
cgccgcggcccgtccgatttcctggaagccctgtacgagcactgcgcgcgcggcttcggc
gagatcgaggtctgggcggaccagcccgccgaggacgccgagaaccccgccctgcaccgc
gcggacgccgaccaggtgtggccgctgcccctcgacgagacggcactcgcccaccgcagg
cgggccgcggccaccgtcctcgaccacctcaaggccctcgcctccgccgacggcgaccac
cagcacgaccacgggcacggtcagggcggcgggcccggccacccgcacccggtggccgtc
cacgacccggacagccacgacgaccccgactggcccccgccccccgacgacgagaccttc
gacgacggcccctaccccgacgacgagccgtacccgggggacgagccgtacaccggggag
gagccctacccggacgaggacgaggacgcggccggctgggacgcctggcccaccgaccgc
ccggccgtcccgcaccaggcggcgcccaccggacccggccacgcgcgcgtacgcccgacg
cgagagcccccgcgcgcgcggcgacaggagcacgaacgcccgcgcaccacccccgaggag
gcccgcgccatcgcctcctgggaccgcgacctcgacgccctcaccggcgagctgctgcgc
gcgcgggaggccgtcaccgacgtcccgctgcccgcctcgctcaccgtctcgcaggtgctg
cggatggccgccgacccggacggattcgcccaggaactcgcccgccccatgccccgcccg
ccgcagcccgccgcccgccgtggcacccgcttccacgcctggatcgaggcccgcttcgaa
gcgctgaccctgcccgtcctcgaacccgacgagctgccgggcgccgaggccgagatcgcc
gacgaacaggacctcgaacacctcaaggacgccttcgaacgcaccgagtacgcccaccgc
accccgcaccgcgtcgaggcccccttccagatcgccatagcgggacgcgtcatcaggggc
cgcatcgacgccgtctaccgggacggcgagggcgacgaggcgcggtacgagatcgtcgac
tggaagaccgcgaggacccacagcgccgatccgctccagctcgccctctaccggctcgcc
tgggccgagcagcacggcatcgaggccgagtcggtcgccgccgccttcgtctacgtccgc
gacggcgaggtcgtcagacccgagaacctgcccggacgggccggactggaaaggctcctc
ctggcggaagccaagtgtgacgaaccgccccccgaggatgtccgtgcgggccgatag
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