Streptomyces griseoviridis: ELQ87_15995
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Entry
ELQ87_15995 CDS
T06660
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ELQ87_15995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgd03021
]
ELQ87_15995
03400 DNA repair and recombination proteins [BR:
sgd03400
]
ELQ87_15995
Enzymes [BR:
sgd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ELQ87_15995
Transcription machinery [BR:
sgd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ELQ87_15995
DNA repair and recombination proteins [BR:
sgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ELQ87_15995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
TarH
Motif
Other DBs
NCBI-ProteinID:
AZS85642
UniProt:
A0A3S9ZCU1
LinkDB
All DBs
Position
complement(3661197..3665096)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQVENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWTRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDVKGE
GRAFGSTAEATMAFDAGELALQSAVDIRFPVGTIPPRGWTPPAREEGEPEWQPGDTFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLGEIVNDLAERYPKVIVAATLDNLKAAGFFWGT
RSGVTVAISDIVVPDAKKEIVKGYEALDEKVQKQYERGLITKEERTQELIAIWTKATNEV
AEAMNENFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLHIAEVG
ADGVLRKADNVETSVYARCLAEDIVVDGKVLGPAGTDLGDVLIDELVKYGVSEVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRIRIEETEKTKKIVVTPDDGSDETAFPISKRARL
LVSEGEHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQESGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggcctggccaccgccgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtcctacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggtgtcccgagccggctcggctacctgctcgacctg
gcccccaaggacctcgagaaggtcatctacttcgcggcgtacatgatcacgtacgtcgac
gaggagcgccgcacccgcgacctgccctccctcgaggcgcacgtctccgtcgagcggcag
caggtcgagaaccgccgggacgccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgaaggc
gccgagcgcgagatgaagcagctgcgcgaccgcgcgcagcgcgagatcgaccgcctcgac
gaggtgtggacccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttcgacggctcgatgggcgccgcggcg
ctccagaagcgcctggagtccttcgacctcgacgaagaggccgagaagctccgcgagatc
atccgcaccggcaagggccagaagaagacccgcgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacagccccaagggcatggtgctcgactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcccccgagatcatcgtcaacaacgagaagcgcatgctccaggaggcggtcgacgcc
ctcttcgacaacggccgtcgcggtcgccccgtcacgggccccggcaaccgtccgctgaag
tccctcagcgacatgctgaagggcaagcagggccgcttccgccagaacctgctcggcaag
cgggtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgc
gctcccaccctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgcccggtcacgatgccgacccaggac
atggtcctcggtctgttcttcctgaccacggacggcgagctgcgggacgtcaagggcgag
ggccgcgcgttcggctccacggccgaggcgaccatggcgttcgacgccggcgagctggcg
ctgcagtcggccgtcgacatccgcttcccggtgggcaccatcccgccgcgtggctggacg
ccgccggcccgggaggagggcgagcccgagtggcagcccggcgacaccttccggctgcgc
accaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctcggcgagatcgtcaacgacctggccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttcttctggggcacc
cgctccggcgtcaccgtggccatctccgacatcgtcgtccccgacgcgaagaaggagatc
gtcaagggctacgaggcgctggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggaagagcggactcaggaactcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggccatgaacgagaacttcccgaagacgaacccgatcttcatgatggtggactcg
ggcgcccgaggaaacatgatgcagatgcgtcagatcgccggtatgcgcggtctggtgtcc
aacgccaagaacgagacgatcccgcgtcccatcaaggcgtcgttccgtgagggcctgtcc
gtgctggagtacttcatctccacccacggtgcccgtaagggtctggcggacaccgccctg
cggaccgccgactcgggttacctcacccgtcgtctggtcgacgtctcccaggacgtcatc
atccgcgaggaggactgcggcaccgagcgcggcctcaagctgcacatcgcggaggtcggc
gcggacggcgtgctgcgcaaggcggacaacgtcgagacgtccgtgtacgcgcgctgcctc
gccgaggacatcgtcgtcgacggcaaggtgctcggcccggccggcaccgacctcggtgac
gtgctcatcgacgagctggtcaagtacggcgtctccgaggtcaagacccgctcggtcctg
acctgcgagtccgccgtcggcacctgcgccatgtgctacggccgctcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctgttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcctccggccgcatccggatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagacggcgttcccgatctcgaagcgtgcccggctc
ctggtcagcgagggcgagcacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggccagcgcgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgggtgacgatcatcgagtccggcgacgccgagctgctgccc
ggcgagctggtcgagcgctccaagttcgagaccgagaaccgtcgtgtggtgcaggagagc
ggtcaccccgcctccggtcgtccgcagctgatgggtatcaccaaggcctcgctggcgacg
gagtcctggctgtcggccgcctccttccaggagacgacccgagtgctgacggacgcggcg
atcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtggagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
accggctccggccaggccgtaccgctggaggactacgactacggtccgtacaaccagtaa
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integrated database retrieval system
