Streptomyces griseoviridis: ELQ87_18775
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Entry
ELQ87_18775 CDS
T06660
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd00040
Pentose and glucuronate interconversions
sgd01100
Metabolic pathways
sgd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ELQ87_18775
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ELQ87_18775
Enzymes [BR:
sgd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ELQ87_18775
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AZS86090
UniProt:
A0A3Q9KPD6
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Position
complement(4242448..4243797)
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AA seq
449 aa
AA seq
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MPAPSHRRSLRKRRALVVSAAAVAAGAAAGALVMNANAGTVDLYHQTLAAKDGWASSGTG
TTGGAKADAAHTFTVSTRAQLVKALGSASDTTPRIIKVKGTIDANTDDSGKKLTCADYSA
GTGYSLPAYLKAFDPASYGRAKLPSGTQETARDAAQDKQAKNIVFKVPSSTSVVGVPGTK
AGITGGMLQIQNVDNVIVRDLTFSATEDCFPQWDPTDGDDGNWNSEYDAVTLRGASHVWA
DHNTFTDAPRFDSANPAYFGREYQVHDGLLDITKGSDLVTVSYNQFTAHDKTMLIGSSDT
DSTGKLRVSIHHNVWRGITQRAPLARLGQIHVYNNLYDTTKLNGYAPQYSINSRAKAQVV
AENNYWTVPSGGKTAKLLSGDGTGSIAGTGNLVNGTTTDLVAAYNAAASKKIKTTVNWTP
TLTAGLEKSAKNLPTTLGTTTGAEVLKES
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgctccctcccaccgccggtccctccgcaagcgccgcgccctcgtcgtctccgcc
gccgcggtggccgcgggtgccgccgcgggcgcgctcgtgatgaacgccaacgccgggacc
gtcgacctgtaccaccagacgctcgccgcgaaggacggctgggcgtcgtcggggacgggc
acgacgggtggcgcgaaggccgacgcggcgcacaccttcaccgtctccacccgcgcgcag
ctggtgaaggcgctgggttccgcgtccgacaccacgccccggatcatcaaggtgaagggc
acgatcgacgccaacaccgacgactcgggcaagaagctgacctgcgcggactactccgcg
ggcaccggctactcgctcccggcctatctgaaggcgttcgacccggcgagctacggccgc
gccaagctgccgtccggcacgcaggagacggcgcgggacgcggcgcaggacaagcaggcg
aagaacatcgtcttcaaggtgccgtccagcacgagcgtcgtcggcgtcccgggcaccaag
gcggggatcaccgggggcatgctccagatccagaacgtcgacaacgtcatcgtgcgcgac
ctgacgttctcggccaccgaggactgcttcccgcagtgggacccgacggacggggacgac
ggcaactggaactccgagtacgacgcggtgactctgcggggcgcgagccatgtctgggcg
gaccacaacacgttcaccgacgcgccgcgcttcgacagcgccaacccggcgtacttcggc
cgcgagtaccaggtccacgacggactgctggacatcaccaaggggtcggacctggtgacg
gtgtcgtacaaccagttcaccgcccacgacaagacgatgctgatcggcagcagtgacacc
gacagcacgggcaagctgcgggtgtccattcaccacaacgtgtggaggggcatcacccag
cgcgcgccgctggcccggctgggccagatccacgtctacaacaacctgtacgacacgacg
aagctgaacggctacgcgccgcagtacagcatcaactcccgggcgaaggcgcaggtcgtc
gccgagaacaactactggaccgtcccgagcggcggcaagaccgcgaagctcctgagcggc
gacggcacggggtcgatcgcgggcaccggcaacctcgtcaacgggacgacgaccgacctg
gtggccgcgtacaacgcggcggcgtcgaagaagatcaagacgacggtgaactggacaccg
acgttgacggcgggcctggagaagtcggcgaagaacctcccgacgacgctgggaacgacg
acgggagcggaggtcctgaaggagtcctga
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