Streptomyces griseoviridis: ELQ87_19945
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Entry
ELQ87_19945 CDS
T06660
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgd
Streptomyces griseoviridis
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgd03021
]
ELQ87_19945
Transcription machinery [BR:
sgd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ELQ87_19945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_31
MarR
HTH_24
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AZS86288
UniProt:
A0A3Q9KUH3
LinkDB
All DBs
Position
complement(4498705..4499595)
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AA seq
296 aa
AA seq
DB search
MSADQGSSKVLTLVKSESAPDAALDDVQVIEVPAAPAPPTASEAIDTRTLSRSLFLRLAA
LAEDSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERG
VEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVAELA
TVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYRESLK
PLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacgctcgtcaagagcgagtccgcgccc
gacgccgcgcttgacgatgtacaggtgatcgaggtccccgcggccccggctcctcccacg
gcctcggaagccatcgacacccgcaccctgtcccgctccctgttcctgcggctcgccgcg
ctcgccgaggacagccccgagcgcgcctacgtccgggacaccctgatcgagctgaacctc
ccgctcgtgcgctacgcggcggcccgcttccgctcgcgcaacgagccgatggaggacatc
gtccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgactgcgaacggggc
gtggagttccccacgttcgcgatgccgacggtggtcggcgagatcaagcggttcttccgc
gacacctcctggtcggtgcgggtcccgcgccgcctccaggagctgcggctggcgctcacc
aaggcgagcgacgagctgtcccagaagctggaccgctcgcccaccgtcgccgaactcgcc
accgtgctcggggtgtccgaggaggacgtcgtcgacggcctcgcggtcggcaacgcctac
acggcctcctcgctcgactccccggccccggaggacgacggcggcgagggctccctcgcg
gaccgcctcggctacgaggacaccgccctcgaaggcgtcgagtaccgcgagtcgctcaag
ccgctgctggccaagctgccgccccgggagcgccggatcatcatgctgcgcttcttcgcc
aacatgacccagtcgcagatcggcgaggaggtcggcatctcccagatgcacgtctcccgg
ctgctcacccgcaccctcgcccagctccgcgagggcctcatctcggactga
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