Streptomyces griseoviridis: ELQ87_24595
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Entry
ELQ87_24595 CDS
T06660
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ELQ87_24595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgd03019
]
ELQ87_24595
03009 Ribosome biogenesis [BR:
sgd03009
]
ELQ87_24595
Messenger RNA biogenesis [BR:
sgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ELQ87_24595
Ribosome biogenesis [BR:
sgd03009
]
Eukaryotic type
Pre-60S particles
RNases
ELQ87_24595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AZS87074
UniProt:
A0A3Q9KVN8
LinkDB
All DBs
Position
complement(5502317..5502919)
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVVRPPDRSLETMPDVVR
QMHTASGLLDELAAGTTLADAEEQVLSYIKEHVKEPGKAPLCGNTVGTDRGFLLRDMPTL
EGYLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSETARTIAAKHVVPAR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgtatggtgtggatcgactgcgagatgaccggtctctcgctgtccgacgac
gcgctcatcgaggtggccgccctcgtcaccgactcggagctgaacgtactcggcgagggc
gtcgacatcgtcgtacgtccgccggaccggtccctggagacgatgcctgacgtggtgcgc
cagatgcacaccgcctccggcctcctcgacgaactcgccgcgggcaccaccctcgcggac
gccgaggagcaggtcctctcctatatcaaggagcacgtcaaggaacccggcaaggcgccg
ctgtgcggcaacaccgtcgggaccgaccgcggcttcctcctccgtgacatgccgacgctg
gagggctacctccactaccgcatcgtcgacgtgtccagcatcaaggagttggcccgccgc
tggtacccgagggcgtacttcaacagcccggagaagaacggcaaccaccgcgcgctcgcc
gacatccgcgagtcgatcgcggagctgcgctactaccgcgaggccgtcttcgtcccccag
ccgggacccgactcggagaccgcgcggaccatcgccgcgaagcacgtggtgcccgcccgg
taa
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