Streptomyces griseoviridis: ELQ87_25640
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Entry
ELQ87_25640 CDS
T06660
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
sgd
Streptomyces griseoviridis
Pathway
sgd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ELQ87_25640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgd03400
]
ELQ87_25640
DNA repair and recombination proteins [BR:
sgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ELQ87_25640
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2293
CAF1
Motif
Other DBs
NCBI-ProteinID:
AZS87239
UniProt:
A0A3S9ZHR9
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All DBs
Position
complement(5713347..5713949)
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AA seq
200 aa
AA seq
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MIFSSWPALFVVDVEGNGTNPPDLVEVAALPVRDGQPDKSTAGAWLTKPKRPVTPFAARV
HGLTNQVLEDKPGWEEIKGAVHELLGTSWIAAHNAHVDYRVLSAHLPQWQPTGVIDTLRL
AKATYPDLPKYSLDALLKHTTPDLSEAPGRRHRAAFDAYATAQLLITMADRYESWDQLVA
AAVPPGLPGAPEPEQEPTLW
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgatcttctcctcctggcccgcgctgttcgttgtcgacgtcgagggcaacggcaccaat
ccgcccgacctggtcgaggtggccgcacttcccgtacgtgacggacagcccgacaagagc
accgccggagcatggctgaccaagccgaagaggcccgtcacgcccttcgccgctcgcgta
cacggcctcaccaaccaggtcctggaagacaagccgggctgggaggagatcaagggcgcg
gtccatgaactgctcggcacttcgtggatcgccgcccacaacgcccacgtggactaccgc
gtcctgtccgcccacctgccgcagtggcagccgaccggagtcatcgacacgcttcggctg
gccaaggccacctatcccgacctgccgaagtacagcctcgacgccctgctcaagcacacg
acaccggacctgagcgaagcccccggtcggcgccaccgcgccgccttcgacgcctacgcg
accgcccagctcctcatcacgatggccgaccggtacgagagctgggatcaactcgtggcc
gccgccgtcccgcccggccttcccggcgcccccgaaccagaacaggagcccaccctgtgg
tga
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